Papers for
medical imaging technicians
Papers whose findings have a practical use for this group, as judged from the abstract. Open a paper to read what it means in practice.
Visual difference guided few-shot anomaly detection improves results
VD-DeepStack: Bridging Visual Comparison and Language Reasoning for Few-Shot Anomaly Detection
Abstract: Few-shot visual anomaly detection is fundamentally a visual comparison task, requiring fine-grained inspection of a query against normal references. Many recent methods based on large vision-language models (LVLMs) emphasize comparative reasoning through language chain-of-thought. Yet discrete, abstract descriptions may underrepresent dense, fine-grained visual differences, leaving a gap between visual comparison and its expression in language. To address this gap, we propose Visual Difference DeepStack (VD-DeepStack), which explicitly conditions language reasoning on query-reference visual differences. Specifically, we fuse DINO features with the LVLM visual hierarchy to strengthen fine-grained representations, then construct dense difference evidence from residuals between query features and softly matched reference features. The difference-evidence path injects spatially weighted difference vectors into query-image states at multiple decoder depths, while an auxiliary visual-context path provides fine-grained appearance information to support their interpretation. Experiments on 4 industrial and 2 medical anomaly benchmarks demonstrate substantial improvements in few-shot anomaly detection over baselines relying on textual comparative reasoning. These results support mitigating the visual comparison-reasoning gap through the joint design of comparison representations and their integration into the decoder. Code will be released upon acceptance.
Bmnd improves denoising for scientific data across all dimensions
BMND: Direct Poisson Denoising by N-Dimensional Block Matching and Collaborative Filtering
Abstract: Poisson denoising of scientific data requires methods that account for signal-dependent noise while accommodating different data dimensionalities and preserving quantitative intensity information. We present BMND, a dimension-independent extension of block matching and collaborative filtering for Gaussian and Poisson observations. Building on the two-stage structure of BM3D and BM4D, BMND processes Poisson data directly, without a variance-stabilizing transform, by combining noise-aware patch matching with propagation of signal-dependent noise variances through collaborative filtering and aggregation. A dimension-independent reference-patch traversal scheme supports arrays with an arbitrary number of axes. An optional aggregation-aware mass conservation preserves the observed total intensity after weighted overlap-add. We evaluate the framework on one-dimensional physiological signals, two-dimensional images, and three-dimensional volumes, using controlled noise experiments and measured fluorescence microscopy acquisitions. The experiments demonstrate improved reconstruction quality from noise-aware matching and Wiener filtering, while low-count phantom experiments show reduced denoising-induced intensity loss through mass conservation. The framework provides a unified, non-learning-based approach to denoising across arbitrary data dimensions and is released as an open-source library.
Active pixel selection cuts errors and storage in image measurement
Active Data Acquisition with Side Information via Discrete Diffusion Priors
Abstract: Acquiring data is costly: higher measurement fidelity costs power and storage and risks collecting irrelevant content, while aggressive cost reduction can discard information that later analysis needs. We address this trade-off with an information-theoretic framework that acquires data relevant to a broad set of tasks rather than to one model. A mask policy, conditioned on side information, chooses which pixels to measure so as to maximize the mutual information between a discrete image and its partial observation under a budget; since the image entropy does not depend on the mask, this is equivalent to minimizing the conditional entropy. A frozen discrete denoising diffusion model (D3PM) supplies the posterior, and we use it in two ways: as an entropy surrogate for training a one-shot mask generator, and as the criterion for sequential greedy acquisition. The one-shot generator outperforms random masks only with care, including an unbiased gradient estimator for binary masks. With sequential acquisition, on MNIST the prior makes $8\times$ fewer errors than random at a $10\%$ budget, and on CIFAR-10 it gains $0.9$--$3.4$~dB. On fastMRI, our proposed technique using a static mask outperforms the well-known methods such as variable density and LOUPE.
Ultra low field mri improved for better pediatric brain scans
A Dual-Stream Regulated Reconstruction and Segmentation Network with Hierarchical Artifact-Prior Modeling for Ultra-Low-Field Pediatric Neuroimaging
Abstract: Automated quality assessment, enhancement, and segmentation of multiple structures in $0.064\,\mathrm{T}$ ultra-low-field pediatric MRI are limited by a low signal-to-noise ratio, weak anatomical boundaries, and frequent artifacts. We present a unified framework for the LISA 2026 Challenge that performs all three tasks together within one inference pipeline. A network with two coupled streams, built on a 3D U-Net, first reconstructs an enhanced uLF volume and then combines the original and enhanced images for subcortical segmentation. To improve boundary stability, we add an auxiliary class covering brain tissue outside the target structures, derived from whole brain masks. A head conditioned on an artifact graph predicts the seven artifact ratings from reconstruction residuals and frozen segmentation features. We address the scarcity of dense annotations using diffeomorphic registration from atlas to target for label propagation and to regularize anatomical reconstruction. We report validation results across all three tasks.
Deep unfolding method improves image reconstruction accuracy
Newton Deep Unfolding for Compressed Sensing
Abstract: Compressed sensing (CS) reconstructs images from highly limited measurements, but existing deep unfolding methods are typically driven by first-order optimization and weakly exploit the optimization states generated during reconstruction. To address these limitations, we propose a Newton deep unfolding network (NDU-Net), which, to the best of our knowledge, is the first deep unfolding framework that leverages second-order optimization for CS reconstruction. Specifically, NDU-Net introduces a Newton update (NU) module to estimate Newton-type update directions and generate optimization states that characterize the current reconstruction process. Furthermore, a Newton-guided multi-scale prior (MP) module is designed to incorporate these optimization states into multi-scale feature restoration, thereby enabling the learned prior to adapt to the current reconstruction stage. Experimental results under different CS ratios confirm that our proposed NDU-Net achieves promising reconstruction performance and exhibits enhanced robustness. Our code is available at https://github.com/xianchaoxiu/DNU-Net.
Physics-driven neural network improves 3-D imaging of complex objects
Multi-Level-Set-Based Physics-Driven Neural Network to Solve 3-D Inverse Scattering Problems
Abstract: This paper proposes a level-set-based physics-driven neural network solver (LSPDNN) for 3-D electromagnetic inverse scattering. To mitigate boundary blurring and reconstruction artifacts in voxel-wise contrast reconstruction, the proposed solver exploits the piecewise homogeneity of practical scatterers by representing unknown targets with multiple coordinate-dependent neural level-set components. Specifically, a soft-union multi-material model is proposed to separately describe the object support and material distribution. The global support is formed by the union of multiple level-set components, while the local contrast is determined by normalized component weights and learnable complex permittivity candidates. In addition, a model-consistent total variation (TV) regularization is imposed on the material-region indicators, rather than directly on the reconstructed contrast, to suppress fragmented material assignments without excessively smoothing material interfaces. An adaptive loss balancing strategy is further introduced to reduce the dependence on manually selected regularization weights. For each measurement instance, the neural level-set parameters and material candidates are optimized by minimizing a physics-consistent objective function. Numerical and experimental results demonstrate that LSPDNN can reconstruct scatterers with clear boundaries, more uniform material regions, and substantially reduced background artifacts. The results highlight the advantage of the neural level-set parameterization in challenging 3-D inverse scattering cases involving irregular shapes, closely spaced objects, multiple materials, and measurement noise.