Engaging the scientific community in high-quality biocuration: a report on the International Society for Biocuration workshop, 'Maximizing community curation for the benefit of all'
Databases
Summary
The authors discuss how biological knowledgebases usually depend on experts to update their data but face challenges as support for this work decreases. To address this, some groups involve researchers themselves in a process called 'community curation,' where many people help update information. The authors organized a workshop with 18 different groups to share how they use community curation, what works and what doesn’t, and to create suggestions for best practices. They aim to make community curation a common and effective way to keep biological data accurate and useful for scientists.
Authors
Daniela Raciti, Susan L. M. Coort, Christian Grove, Jade Hotchkiss, Matt Jeffryes, Nancy T. Li, Zhiyong Lu, Bastien Molcrette, Sushma Naithani, Maria Victoria Nugnes, Jolene Ramsey, Rene Ranzinger, Leonore Reiser, Karen E. Ross, Garrett Stevens, Courtney Thaxton, Sabrina Toro, Valerie Wood, Karen Yook, Kimberly Van Auken
Abstract
Biological knowledgebases traditionally rely on expert, professional curation of the research literature to maintain up-to-date collections of data organized in machine-readable form. However, despite the increasing amount of curatable biomedical knowledge, support for knowledgebases is declining, leaving these resources no alternative but to explore additional ways of updating and maintaining content. One way in which knowledgebases have addressed this problem is by engaging researchers to help curate their published papers, a process generally known as 'community curation'. As helpful as community curation can be, though, it is not universally adopted and, for groups that do have it, there is a wide range of approaches. To learn about existing community curation pipelines and explore possibilities for working towards a common approach, we organized a workshop, Maximizing Community Curation for the Benefit of All, at the 18th International Biocuration Conference, hosted by the Stowers Institute for Medical Research. Our aim was to examine the different strategies that groups use, share successes, failures, and ongoing challenges, and produce suggested deliverables for broader adoption of common best practices and tools for effective community curation. Representatives from 18 different resources, ranging from model organism and specialty knowledgebases to journals and literature resources, presented their work. The result was a comprehensive assessment of the state-of-the-art for community curation and an in-depth discussion on how community curation can become standard practice for maintaining timely, highquality biological resources that will continue to provide scientists with the essential information they need for their research.