Papers for
public health analysts
Papers whose findings have a practical use for this group, as judged from the abstract. Open a paper to read what it means in practice.
Google search patterns show different strengths predicting covid cases and responses
Asymmetric Bidirectional Predictive Dynamics in Google Search and COVID-19 Time Series: A Multi-Horizon Forecast-Error Analysis
Abstract: Online search activity is widely used as a digital trace of information seeking during epidemics, but its predictive value is often reduced to correlation, a selected lag, or a single forecast-error score. We examine eight pre-specified Google Trends-COVID-19 pairs in both directions using matched LightGBM forecasts over rolling 400-day windows and horizons of 1-14 days. Log-RMSE gain is combined with forecast-error distribution entropy (FEDE), which captures horizon-dependent changes in the signed error distribution. The resulting directional predictive signature comprises response class, RMSE effect, FEDE endpoint and early-slope responses, persistence across rolling regimes, and horizon profile. For screening candidate directions, we also introduce a relative persistence-weighted directional predictive response strength (DPRS) on a within-study 0-100 scale; 100 denotes the strongest observed response in the comparison set, not an absolute coupling maximum. The pairs show concordant, RMSE-only, FEDE-only, and mixed responses. "loss of smell" -> reported cases is accuracy-dominant, with mean log-RMSE gain 0.104 (about 9.9% equivalent RMSE reduction) and DPRS 100, whereas the reverse direction is FEDE-dominant (D_FEDE=0.048; DPRS=42). "covid test" -> positive rate is FEDE-dominant (D_FEDE=0.039; positive in 72% of windows; DPRS=98) despite negative RMSE gain, while "lockdown" -> stringency is the clearest concordant case (DPRS=78). World-level symptom/case pairs are less persistent. Thus, forecast accuracy and error-distribution dynamics are complementary, predictive effects can be direction- and metric-dependent, and forecast horizon is part of the relationship. Aggregated regime-level patterns should not be extrapolated to individual time points or interpreted as evidence of causality.
PlacePulse creates detailed map embeddings from local structural data
PlacePulse: Learning Transferable Place Representations from Structural Geographic Data
Abstract: Geospatial machine learning often depends on task-specific feature engineering over large collections of sociodemographic, business, and environmental variables. Geospatial foundation models offer reusable representations of place, but leading approaches typically encode dynamic signals, such as mobility and search activity, or visual signals from satellite imagery. Few models represent the static structural composition of places (who lives and works there, which businesses operate there, and which risks they face) as transferable embeddings at fine spatial resolution. We introduce PlacePulse, a structural geospatial foundation model that compresses 572 attributes, expanded to 2,288 inputs through H3 neighborhood aggregates, into 256-dimensional unit-norm embeddings for 1,055,537 H3 resolution-7 cells in the United States. We also introduce a reusable two-axis benchmark that separates intrinsic representation quality from downstream predictive utility across multiple targets and spatial supports. Intrinsically, the embeddings reconstruct standardized inputs with mean $R^2 = 0.853$, use 251 of 256 approximately decorrelated dimensions, and show strong spatial organization, with Moran's $I = 0.93$ on the leading principal component and autocorrelation persisting beyond the input radius. Extrinsically, across 74 held-out targets from 12 external sources and four spatial supports, PlacePulse outperforms a dimensionality-matched feature-selection baseline on targets unrelated to the training inputs and is competitive with Google's Population Dynamics Foundation Model, leading on health, economic, election, economic-mobility and social-vulnerability outcomes, with relative strengths that vary by domain. These findings position structural composition as a distinct and complementary modality for geospatial foundation models, not simply a fallback where behavioral or imagery data are unavailable.
Graph neural networks estimate spreading rates in social networks
Gated Graph Neural Networks for Learning Hidden Independent Cascade Dynamics
Abstract: Information and infectious diseases spread through social networks, but the spreading probabilities driving them are hard to estimate without per-node activation times. Applications seldom supply these, and inference must instead proceed through indirect and noisy proxies for the terminal infection states. We study this inverse problem on a fixed, known graph under the Hidden Independent Cascade (HIC) model, with one spreading probability per node rather than a single global rate, so the number of unknowns scales with the number of nodes. Seed sets and observation parameters are known, while activation times and terminal infection states are latent, and the observed-data likelihood requires marginalizing over every spreading outcome. We propose a simulation-based amortized estimator that recovers the full node-level parameter vector without reconstructing individual latent cascades. Repeated seed-conditioned symptom observations are summarized as Symptom-Aware Cascade Features (SACF), which combine empirical symptom statistics with neighborhood and structural information. SACF are mapped to parameters by SAGE-HC, a permutation-equivariant gated graph neural network whose learned gates attenuate neighborhood messages corrupted by false positives and false negatives, and training on simulated HIC realizations yields a reusable inverse map. As a benchmark under the same hidden observations, we extend the Dynamic Message Passing learning framework to the HIC emission model. On synthetic and empirical graphs the two methods separate by topology. DMP is highly accurate on trees, whereas SAGE-HC is substantially better on heterogeneous, loopy graphs under noisy terminal symptoms.
Policy learning method controls treatment harm risk without assumptions
Conformal Policy Learning with Distribution-Free Safety Guarantees
Abstract: Policy learning aims to determine who should be treated based on individual characteristics. In high-stakes settings such as medicine and public policy where safety is a central concern, improving the average outcomes alone may not be sufficient: decision makers may also seek to protect individuals from harm, in line with the Hippocratic principle of ``do no harm.'' In this paper, we propose \textit{conformal policy learning} (CPL), a policy learning procedure with a new distribution-free safety guarantee that controls the probability of assigning treatment to an individual who would be harmed relative to control. CPL views each treatment decision as testing a hypothesis of counterfactual harm and assigns treatment by thresholding conformal p-values. These p-values use observable proxies and selective calibration to address the challenge that the potential outcomes under comparison are never simultaneously observed. For randomized experiments, under standard exchangeability conditions, CPL provides finite-sample safety guarantee at a user-specified level, without imposing any outcome modeling assumptions. Moreover, when the outcome model is consistently estimated, CPL achieves asymptotically optimal welfare subject to the safety constraint. In observational studies, CPL with learn-then-balance weights achieves doubly robust safety guarantees. We evaluate CPL through extensive simulations and apply it to an empirical study of AI-powered interventions designed to reduce conspiracy beliefs.
Data storytelling helps simple data tasks but not complex thinking
"Piecing Data Connections Together Like a Puzzle": Effects of Increasing Task Complexity on the Effectiveness of Data Storytelling Enhanced Visualisations
Abstract: The emerging concept of data storytelling (DS) suggests that enhancing visualisations with annotations and narratives can make complex data more insightful than conventional visualisations. Previous works found that DS-enhanced visualisations are more effective than conventional visualisations for simple tasks like identifying key data points or the main message. However, no previous work has explored the extent to which DS enhancements influence task completion across different levels of cognitive complexity. We address this gap by presenting the results of a study where 128 participants completed tasks based on four visualisations (two line charts and two choropleth maps, either with or without DS elements) spanning a range of complexity based on Bloom's taxonomy, which has been applied in data visualisation to categorise tasks hierarchically from lower to higher-order thinking. Results suggest that while DS-enhanced visualisations effectively support lower-order tasks (finding data points and understanding insights), they don't necessarily aid the correct completion of higher-order tasks (application, analysis, evaluation and creation). However, DS enhancements improve how efficiently participants complete complex tasks.
Method estimates treatment effects amid network interference
Conformal Individual Treatment Effect Estimation under Networked Interference
Abstract: Conformal counterfactual prediction constructs prediction sets with finite-sample coverage guarantees for counterfactual outcomes and individual treatment effects under the no-interference assumption. In this work, we relax this assumption by allowing each unit's potential outcomes to depend on other units' treatments and covariates. In this setting, propensity-score reweighting does not restore weighted exchangeability, and existing methods may fail to achieve valid coverage. To address this issue, we develop interference-adjusted weighted conformal prediction that accounts for interference by constructing an observable upper bound on the ideal and unobserved conformal $p$-value under the target intervention. The resulting prediction sets provide finite-sample marginal coverage guarantees for counterfactual outcomes and individual treatment effects in both transductive and inductive settings. We also derive a sharper construction when intervention-induced changes in nonconformity scores are bounded. Numerical experiments show that our methods preserve nominal coverage, whereas existing methods may not.
Geospatial models reveal health insights missing in social risk data
Geospatial Foundation Models Capture Health-Relevant Dimensions of Place Beyond Conventional Social Risk Indices
Abstract: Area-based social risk indices summarize residents' socioeconomic conditions but incompletely capture physical features of place that may affect health. We evaluated whether numerical representations of physical place produced by four geospatial foundation model families from 2022 satellite data explained residual variance in tract-level associations between the Area Deprivation Index, Social Deprivation Index, and Social Vulnerability Index with health outcomes. We used LightGBM to predict variables from the American Community Survey and 40 chronic disease and health-behavior outcomes from CDC PLACES across 82,646 census tracts in the contiguous United States, evaluating performance across 10 held-out states. Among survey variables, models were moderately predictive of some variables including housing type (R-squared up to 0.54) but weak for disability, unemployment, and income disparity. For health outcomes, models explained up to 54% of variance left unexplained by social risk indices, with the largest gains for annual checkups, arthritis, and high blood pressure. Mean total variance explained by geospatial foundation models across the 40 health-related outcomes increased from 0.31 in the smallest tract-size decile to 0.39 in the largest. Geospatial foundation models capture health-relevant features of place not represented by conventional social risk indices and may usefully augment them in epidemiological analyses.
Large language models partially mimic survey responses after health intervention
How Well Do LLMs Simulate Survey Responses Following a Breast Cancer Screening Intervention?
Abstract: Collecting survey data is laborious and limited by privacy constraints. Large language models (LLMs) have shown promise as predictive social simulations. It is unclear whether they can replicate population-level response distributions before and after a healthcare intervention. Using information derived from 4125 women aged 35-59 years, we evaluate whether agents informed solely by pre-intervention profile information can reproduce post-intervention response distributions. Groups of LLM agents (n=50) were created with Gemma 4 E4B and Qwen3.5 9B; conditions ranged from zero-shot prompting to agent profiles enriched with aggregate or individual-level demographic characteristics and pre-intervention questionnaire responses. We compared predicted and observed response distributions with Total Variation Distance (TVD) and Normalized Wasserstein Distance (NWD). Across both LLMs, profile-based agents improved distributional accuracy relative to zero-shot and random baselines. Nevertheless, direct sampling of 50 real participants remained more accurate. Prediction errors were also higher among participants aged 55-59 years and those living in private property. Errors also varied by question theme and LLM model, with the highest errors observed for cancer fatalism and post intervention attitudes toward genetics. Sensitivity analyses showed that performance was influenced by prompt template changes and temperature hyperparameter. Our results show the potential of LLM-based agents to model behavioral responses to interventions in silico. However, profiles containing additional information beyond demographics did not consistently outperform simpler ones. Certain cultural constructs and population groups also remain inadequately represented by the LLM models evaluated. Future work may include building behaviorally grounded and locally validated virtual populations.