Papers for

neuroimaging teams

Papers whose findings have a practical use for this group, as judged from the abstract. Open a paper to read what it means in practice.

Entropy measures reveal patterns in time series from brain and heart data

Revisiting entropy and entropy-related magnitudes of a symbolic sequence and their estimation

Abstract: This article revisits entropy and related magnitudes (entropy density, effective measure complexity, and informational distance) for the analysis of sequential data. We present their mathematical foundations within information theory and ergodic theory, establishing connections between probabilistic Shannon entropy and algorithmic Kolmogorov complexity. A central result, Zivs theorem, demonstrates the asymptotic equivalence between the normalised number of distinct words and entropy density, providing the theoretical basis for estimation via Lempel-Ziv factorisation. We examine the convergence properties of these magnitudes and introduce estimation procedures for finite sequences, including a method for the effective measure complexity and the transfer entropy rate. An open-source software library implementing parallel algorithms for efficient Lempel-Ziv factorisation is presented. The practical utility of the framework is illustrated through three case studies: functional brain connectivity analysis from fMRI data, characterisation of spatiotemporal dynamics in coupled nonlinear oscillators, and electrocardiogram-based classification of atrial fibrillation, demonstrating how entropic measures capture meaningful structural and dynamical properties across diverse domains.

Mon 26 OctInformation Theory
The gist
Measuring the randomness or complexity in sequences of data helps us understand underlying patterns. The authors revisit mathematical ways to quantify such complexity and connect them to known theories about information and algorithms. They show how to estimate these measures from real data using a popular compression method. Their open-source software makes this efficient. They demonstrate the approach on brain signals, oscillator networks, and heart rhythm data to find meaningful insights.
Open → 2610.35121v1

Stable graph filters improve generating signals on networks

Stable Filters for Generative Modeling of Graph Signals

Abstract: Generating signals on graphs requires permutation-equivariant models that exhibit stability with respect to relative structural perturbations. While recent graph-aware Schrödinger bridge models incorporate topology information directly into their reference dynamics, it is unclear how perturbations of the graph propagate through these dynamics and affect the resulting generated distributions. In this paper, we analyze the structural stability of graph-aware continuous-time generative models whose drift combines a graph filter with a learned graph neural network. We derive explicit Wasserstein stability bounds that quantify the effect of relative graph perturbations on the generated distributions. Motivated by these bounds, we introduce a principled framework for designing stable graph filters that preserve the smoothing behavior of graph heat diffusion, while boosting structural stability. Experiments on synthetic and fMRI signals show our stable filters enhance structural robustness while matching or exceeding the generative quality of the heat equation baseline.

Wed 16 SeptMachine Learning
The gist
Generating data on network-like structures needs models that stay reliable when the network changes a bit. The authors studied how small changes in the network affect these models and created stable filters that handle such changes better. These filters keep the helpful smoothing effects of known approaches but make the output less sensitive to changes in the network. Tests on simulated and brain activity data show these filters match or beat previous methods in quality while being more stable.
Open → 2609.18759v1