Papers for
materials modeling teams
Papers whose findings have a practical use for this group, as judged from the abstract. Open a paper to read what it means in practice.
System size affects uncertainty estimates in machine learning atom models
Does System Size Matter in Uncertainty Quantification for Machine Learning Interatomic Potentials?
Abstract: Machine-learning interatomic potentials (MLIPs) commonly use uncertainty estimates to flag out-of-distribution (OOD) configurations and select structures for active learning. A key question is whether the resulting structure-level uncertainty scores remain comparable across different system sizes. A common practice is to aggregate per-atom uncertainties by their mean or maximum and compare the resulting score against a fixed threshold, implicitly assuming such comparability. We test this assumption across several in-distribution (ID)/OOD pairs by characterizing both aggregations as a function of atom count. The two aggregations exhibit distinct size dependencies. Mean aggregation remains size-independent for homogeneous systems but loses sensitivity to defects in large cells. In contrast, maximum aggregation grows with system size for ID systems while remaining approximately flat for defect-containing systems, narrowing the ID-OOD gap in a manner consistent with extreme-value statistics. Although highly uncertain atoms in large structures may indicate novel local environments, retraining on these structures yields little improvement, in contrast to retraining on OOD structures constructed to lie outside the training distribution. Our results reveal a practical limitation of size-unaware uncertainty criteria and motivate size-aware calibration for more reliable OOD detection in large-scale atomistic simulations.
Gaussian clouds speed up quantum chemistry simulations to thousands of atoms
Scaling Density Functional Theory with Gaussian Splatting
Abstract: Density functional theory (DFT) strikes a practical balance between accuracy and computational cost in many problems of computational chemistry and materials science. However, many DFT calculations are limited by fixed atom-centered basis sets, which dictate how accuracy and cost scale with system size. We propose Gaussian Splatting for Density Functional Theory (GS-DFT), which represents molecular orbitals as a cloud of Gaussians whose positions, shapes, and mixing coefficients are optimized jointly by gradient descent to minimize the energy without training data. Conceptually, GS-DFT is 3D Gaussian splatting with the renderer replaced by quantum mechanics. We introduce two key solver components: adaptive density fitting with screening for efficient evaluation of two-electron integrals, and a regularized differentiable orthogonalization of the molecular orbitals. Empirically, the optimized basis reaches the accuracy of the largest conventional basis sets with a fraction of the parameters, converging systematically in energy, density, and nuclear forces. At equal parameter count, it captures the stretched-bond and anion physics that fixed bases only recover with specialized basis augmentation. The resulting solver exhibits quadratic peak memory scaling in the cloud size, allowing us to simulate systems of up to 2,742 atoms (10,406 electrons) without any modifications at triple-zeta scale using a single four-GPU node.