Papers for
machine learning system developers
Papers whose findings have a practical use for this group, as judged from the abstract. Open a paper to read what it means in practice.
Hardware malware detectors vulnerable to silent faults in classifiers
Silent Blindness: Fault Vulnerability of Hardware Malware Detectors
Abstract: Hardware malware detectors (HMDs) classify hardware performance-counter measurements to identify malicious execution. Faults in their decision logic or parameters can weaken detection and allow malware to be classified as benign. We investigate this vulnerability through structural fault injection across a design space comprising 18 classifiers, four counter budgets, and AdaBoost and Bagging ensembles. The simulation evaluates 453,174 decision stuck-at and selected parameter bit-flip events on a 7,400-instance. Primary comparisons use 128 completed configurations. These completed-subset results are distinguished from the simulation summaries covering 140 configurations with enumerable fault sites. Fault outcomes are classified by their security consequences, including evasion, false-alarm increases, and metric silence. A fault is critical when malware recall decreases by at least five percentage points. Tree-based models exhibit a lower mean critical-fault fraction than function-based models, 5.3% versus 14.3%; exhaustive-only analysis preserves this ordering. Moreover, 72.3% of evaluated tree faults are metric-silent, changing both recall and false-positive rate by less than 0.1 percentage points without necessarily preserving individual predictions. Among the 27 completed matched comparisons, Bagging reduces criticality in 26, whereas AdaBoost increases it in two. Finally, an exact minimax selection method identifies protection candidates under additive unit costs and ideal correction. For a representative J48 detector, protecting 16 of 115 structural units reduces predicted maximum recall loss from 60.1 to 3.3 percentage points. These results characterize structural-model sensitivity and potential protection benefits; faulted RTL correspondence and physical hardening overhead remain unvalidated.
Limits and algorithms for private sparse linear regression models
On the Limits of Sparse Linear Model with Shuffled Differential Privacy
Abstract: Sparse linear regression is a fundamental problem in high-dimensional statistics, and its private counterparts leave a large gap between the central and the local model of differential privacy. Shuffled differential privacy (SDP) sits between the two, offering accuracy closer to the central model without the trust requirement of a central curator. This paper studies sparse linear regression under both non-interactive and interactive SDP protocols. In the non-interactive setting, any non-interactive $(ε,δ)$-SDP protocol is shown to incur an $\ell_2$-norm estimation error of $Ω( \frac{\sqrt{dk}}{nε} )$ with dimension $d$, sparsity $k$, and $n$ users, revealing an inherent dimensionality barrier. In addition, a non-interactive algorithm is proposed that achieves an $\ell_2$-norm upper bound of $\tilde{\mathcal{O}}( \sqrt{\frac{k}{n}} + \frac{d\sqrt{k}}{nε})$. To overcome this barrier, we turn to the interactive user-level setting, where each user holds $m$ samples. A two-round interactive algorithm is developed that first recovers the support through a heavy hitter step and then estimates the parameter, achieving an error of $\tilde{\mathcal{O}}( \sqrt{\frac{k}{nm}} + \frac{k}{n\sqrt{m}ε} )$ with no polynomial dependence on $d$. Furthermore, by extending the score attack framework to user-level data, a new lower bound $Ω( \sqrt{\frac{k\log(d/k)}{nm}} + \frac{k\log(d/k)}{n\sqrt{m}ε} )$ is established for any user-level $(ε,δ)$-DP, showing that the proposed algorithm is near-optimal with only a gap of the factor $\log(d/k)$.
Reward misspecification reduces language model reasoning monitorability
Reward Misspecification Degrades Chain-of-Thought Monitorability
Abstract: Monitoring the chain-of-thought (CoT) of language models (LMs) is a key strategy for detecting and preventing misbehaviors for AI safety. As such, it is critical to identify reinforcement learning (RL) practices that lead to unmonitorable chain-of-thought. One such practice may be unavoidable: reward misspecification. As RL environments become more complex, it is infeasible to have perfect verification, and models are rewarded for behaviors that are different from the true task intent. We show that reward misspecification alone already degrades monitorability. We create a testbed with pairs of true reward aligned with task intent and misspecified rewards that favor a different behavior, so that reward hacking can be induced by training and labeled verifiably. Across three models and three tasks, CoT monitorability remains low as models' hack rates increase: the CoTs keep reasoning about the task intent while the outputs violate the intent and get rewarded. To mitigate unmonitorability without prior knowledge of the true reward or the hack, we collect rollouts with diverse rewards across training steps and use a LM to infer a reward description. We then inject the description into the input, which teaches the model to verbalize the reward. This reward description training improves monitorability by an average of 24% or 42% absolute, depending on the metric, across all models and tasks, and yields CoTs that reason about the misspecified reward explicitly. Code is available at https://github.com/Lorenayannnnn/reward-misspecification-degrades-cot-monitorability.
Efficient two pass scheduling speeds up dynamic nearest neighbor graph updates
Refined Topology-Pass Scheduling: Damped Trust-Region Compensation for Dynamic k-NN Graphs in SE(3)-Equivariant Structure Prediction
Abstract: Equivariant structure-prediction pipelines alternate coordinate updates with the construction of a k-nearest-neighbour (kNN) graph whose membership is a discrete, piecewise-constant function of the coordinates. Rebuilding that graph at every block boundary (PB) is the expensive part of an epoch, whereas reusing one frozen graph (F) is fast but leaves a topology gap. We study a two-pass design in which the cheap pass records a small amount of state (margins, kNN radii, measured per-boundary displacements) and a second pass compensates conservatively. We formulate the choice of the graph-construction basis as a damped fixed-point iteration whose unique fixed point is exactly PB, and derive (i) exact non-flip certificates with the two-sided constant $m_i/4$ and one-sided constant $m_i/2$, (ii) the minimum-variance (BLUE) replay gain $γ^*$ and the resulting feasibility crossover, (iii) an $\ell_\infty$ trust-region projection that preserves convergence, and (iv) an analytic near-tie spacing law $E[m] \approx r_k/(3k)$ that matches measurements to 1\%. Three compensation levels are implemented in C++ (L1: frozen set with live geometry; L2: margin-gated local repair; L3: damped, projected basis) and validated under a matched-conditions protocol (identical seed, MSA depth and trajectory family, only the topology mode differs). L2 reproduces the PB edge set exactly ($D = 0.0000$ at every boundary), L1 stays within 0.6% and L3 interpolates monotonically: L2 reproduces the PB edge set exactly when the trust region is removed, and L3 interpolates between the frozen and the PB topology. The recorded trajectory itself yields a measured $1.5\times$ Pass-1 and $1.76\times$ epoch speed-up with no measurable loss gap. An open-source implementation of the runtime and of all the experiments reported here is available at https://github.com/AlbertHuang96/ProteinPredictMachineLearning.
Graph approach improves understanding of transformer language model weights
Graph Metanetworks for Transformer Based Language Models
Abstract: Weight-space learning treats the weights of neural networks as data, processed by other models called metanetworks. A key challenge is that different weights can realize the same function, related by a group of symmetries the metanetwork should respect. While symmetry-aware metanetworks for simple architectures such as MLPs are well developed, a comprehensive treatment of transformers, and in particular transformer-based language models, is still missing. Importantly, their weight space has a richer symmetry group: beyond neuron permutations, attention introduces continuous general-linear symmetries of the attention matrices and permutations of entire heads. Existing methods for transformer weights either capture only part of these symmetries or are restricted to a single, fixed architecture, and none accounts for language-model-specific components such as the token embeddings. Building on graph metanetworks, we propose a graph-based approach that is both symmetry-aware and applicable across depths and widths. We formalize a weight-space symmetry group of complete decoder-only language models and provide a graph construction that is invariant to it. We further introduce two new transformer-population datasets with novel tasks, such as training-corpus prediction and fine-tuning detection, on which our approach notably outperforms existing baselines.
Quantum graph neural networks compete with classical models using fewer parameters
Quantum Graph Convolutional Networks: Implementation and Trainability Analysis
Abstract: Graph Neural Networks (GNNs) achieve state-of-the-art performance on graph-structured data, but training and inference on large graphs are often bottlenecked by memory constraints and sparse linear-algebra workloads. Quantum computing offers an alternative set of primitives that may improve scalability for graph learning. Building on the quantum graph neural network (QGNN) framework of Liao \textit{et al.}, this work implements two representative architectures --- the Simplified Graph Convolution (SGC) and Linear Graph Convolution (LGC) models --- and evaluates them on open benchmark graph datasets and semi-supervised learning tasks using quantum simulation. We compare predictive performance and optimization behavior against classical baselines, showing that the quantum models achieve competitive performance with fewer parameters. Finally, we present a cost gradient analysis that identifies the tasks for which the models showcased are trainable. This is followed by a classical simulability study to find regimes in which the proposed circuits remain robust during training.