Papers for
healthcare it administrators
Papers whose findings have a practical use for this group, as judged from the abstract. Open a paper to read what it means in practice.
Morpheus removes patient identifiers from greek clinical notes locally
Morpheus: a fully local, defense-in-depth de-identification engine for Greek clinical text - a benchmark evaluation
Abstract: Background and Objective: Clinical free text cannot leave the hospital without de-identification, yet no de-identification system or benchmark exists for Greek clinical text. We evaluated Morpheus, a fully local de-identification pipeline for Greek clinical documents, on 500 synthetic discharge summaries. Methods: The notes (300 cardiac surgery, 100 cardiology, 100 nephrology) were generated by a frontier large language model (Gemini 3.1 Pro) constrained to authentic Greek hospital document layouts. Notes were pre-annotated at generation; two clinicians then independently reviewed and corrected every note, blinded to each other, with disagreements arbitrated. Primary outcomes were recall over must-redact identifiers and over-redaction of clinical content, measured over must-survive probes. Secondary outcomes: residual leaks flagged by an independent egress-review layer, processing time and reproducibility. Results: Inter-annotator agreement was F1 = 0.998. The de-identification rate was 96.59% (7,666/7,937 identifier instances; 95% CI 96.16-96.96): 98.49% for direct and 93.42% for quasi-identifiers. No patient's own complete identifier survived in any note; of 271 residual instances, 199 (73.4%) concerned institutional identity, chiefly the hospital letterhead. The over-redaction rate was 2.82% (190/6,747 probes; 95% CI 2.45-3.24). The egress guard flagged 2 of 271 residuals, both complete telephone numbers. Two independent runs gave identical verdicts. Conclusions: A fully local, deterministic pipeline removed 98.5% of direct patient identifiers from Greek clinical text while altering under 3% of protected clinical content; most residuals concerned the institution, not the patient. To our knowledge this is the first benchmark evaluation of clinical-text de-identification for Greek and the first quantified evaluation of an independent egress-guard layer.
Privacy conductor enforces document access policies outside language models
Privacy Conductor: An Architectural Enforcement of Contextual Integrity in LLM-Based Document Retrieval
Abstract: Large language model (LLM) that retrieve internal documents within an organization must decide who may receive them. Existing approaches based on Contextual Integrity ask the model to make that decision, so access depends on probabilistic reasoning. We present Privacy Conductor, an architecture that removes the decision from the model: a deterministic gate enforces a policy written by an authority, and the model receives only what the requester may already see. On a synthetic clinical corpus of 2,520 requester--document flows, the gate reproduces its policy exactly, so the remaining risk lies in the document labels it reads. As label source is of primary importance, we compare LLM and human generated labels. Across seven configurations of six models from two model families, LLM-written labels degrade the policy in every case. Models assign a document's sensitivity tier correctly on 78--86% of documents, but reproduce its access-control list on as few as 23%. Relabeling the same documents five times with an identical request changes 13 to 124 access decisions per configuration, a result that does not depend on our own labels. On 214 flows from HIPAA court cases, the most accurate configuration (87.8%) still permits 11 of the 20 disclosures the law prohibits. LLMs can describe what a document contains, but not decide who should receive it. Hence, we recommend privacy policy should be authored by accountable personnel and enforced outside the model.
Federated learning network enables secure multicenter clinical research
Multi-center Medical Data Mining with FL-Net - A One-stop Shop for Federated Learning
Abstract: Federated learning enables collaborative training without sharing patient-level data, but most studies remain simulations. Based on five requirements derived from the literature, we analyzed 14 FL frameworks and found that none fully satisfied these requirements. We present FL-Net, a novel federated clinical research framework to fulfill all requirements. It integrates modular data harmonization, data discovery, disclosure control, securely built versioned FL-Net-Tools and containerized federated workflow execution into a persistent network. It enables the re-use of harmonized data and workflows across studies. FL-Net's end-to-end capabilities were evaluated through harmonization, cross-study patient discovery across MIMIC and US-130, and reproducible, audited federated workflows with up to 50 concurrent clients. FL-Net is being developed within the dAIbetes and Microb-AI-ome EU projects and will cover over 800,000 patients across 10 hospitals in 9 countries covering longitudinal and single point in time data, FL-Net provides a practical foundation for interoperable, reproducible, and privacy-preserving multicenter clinical research.