Papers for
data engineers
Papers whose findings have a practical use for this group, as judged from the abstract. Open a paper to read what it means in practice.
Inference-only method generates synthetic tabular temporal and relational data
Synthesis Without Training: An Inference-Only Pipeline for Tabular, Temporal, and Relational Synthetic Data
Abstract: Synthetic data generation is dominated by the fit-then-sample paradigm: a generative model is trained on a private dataset and then sampled from. Despite its widespread adoption, this paradigm faces three challenges: (1) a new training run is required for every dataset; (2) different data modalities, such as single tables, time series, and relational databases, require task-specific models and feature engineering; and (3) the resulting model is opaque, making its behavior under data constraints difficult to inspect. We propose GENSCRIPT, an inference-only pipeline that eliminates model training. GENSCRIPT computes a deterministic statistical profile of the source data (column types, ranges, missingness, categories, correlations, etc.) and passes it--rather than raw rows--to a language model to infer field semantics and cross-column integrity constraints. A coding agent then compiles the profile and constraints into an executable, auditable sampler. This unified approach supports single-table, temporal, and relational data without task-specific modeling. Across four single-table benchmarks, GENSCRIPT builds generators in 2 minutes and samples 50k rows within 6 seconds, while remaining within a few points of leading methods in marginal fidelity. Notably, it is the only method that perfectly preserves a 1-to-1 mapping between columns in the Adult dataset. On a smart-building dataset, it produces conditional time series that more closely match the real distribution than two baselines and perfectly preserves primary- and foreign-key relationships in the corresponding relational database.
Spectral distance bounds reveal patterns in reconstructed graphs
A Spectral Theory of Distortion in LLM Graph Reconstruction: Sharp Bounds and Empirical Characterization
Abstract: Evaluations of graph reconstruction by language models typically report a single aggregate distance between the original and the reconstructed graph. We prove that for the Wasserstein distance between Laplacian spectra such a summary is bracketed by two edge counts, the net change in edge number from below and the symmetric difference from above, each scaled by $2/n$ where $n$ is the number of vertices. The bracket is sharp: its two ends coincide exactly when the reconstruction only adds edges or only deletes them, and on that class the distance is a rescaled edge count that says nothing about which edges changed. When the ends differ, the residual between the distance and the lower end is positive only if the reconstruction both invented and lost edges, which turns it into a certificate of mixed editing computable from the reported summaries alone. We characterize these regimes in 135 reconstructions produced by three open-weight models over 45 synthetic graphs. Seventy-seven outputs are one-sided and 29 mixed outputs have $X > 0$, including cases where edge count is exactly preserved while nineteen edges were simultaneously invented and lost. The three models differ in editing policy, ranging from copying the input to attempting completion at the cost of large hallucination volume, a distinction that aggregate distortion does not reveal.
Graph transformers produce stable large-scale interaction patterns
Attention Graphons: A Graph Limit Perspective on Graph Transformers
Abstract: Graph Transformers produce, for each attention head, a dense $n\times n$ matrix of learned pairwise interactions. We ask a fundamental question: do these attention-induced graphs converge to a stable limit object as $n$ grows, or does the learned interaction pattern remain unstructured and size-dependent? We answer this using dense graph limit theory, treating each attention matrix as a finite sample from an underlying kernel---an \emph{attention graphon}---and studying concentration around this limit under the cut-distance. We derive a worst-case variance bound requiring no assumptions on the graphon, and a sharper regularity-aware bound based on nonparametric estimation theory. To operationalize the theory, we propose a canonicalize-then-block-average pipeline for estimating dataset-level attention graphons, and a variance-based diagnostic for testing whether attention admits a stable continuum description. Experiments across multiple graph benchmarks show that learned attention stabilizes to dataset-specific graphon structure on several datasets; that empirical cut-distance and cut-norm variance decreases with $n$ consistent with our bounds; and that attention graphons transfer to larger graph sizes with error decreasing in $n$.
Algorithms improve grouping accuracy as items arrive in random order
Competitive Random-Order Correlation k-Clustering
Abstract: Correlation clustering has been extensively studied over the last two decades in many different computational models owing to its wide-ranging practical applications. The goal is to compute a partition of the vertex set such that the total number of disagreements, i.e. the sum of edges between clusters, and non-edges within clusters, is minimized. In this paper, we study correlation $k$-clustering, in which the total number of clusters is restricted to $k$. Correlation $k$-clustering is NP-hard, and while previous work has presented a polynomial time approximation scheme for constant $k$, there are no known results for general $k$. Our first result is a polynomial-time constant-factor approximation algorithm for correlation $k$-clustering for general $k$. The main focus of this work is in the more challenging online setting. Noting that the best competitive ratio under adversarial arrivals is known to be $Ω(n)$, we concentrate on the well-studied random-order model, where vertices arrive in random order and on arrival of a vertex, edges to its earlier-arrived neighbors are revealed. We prove a surprising lower bound of $Ω(\log k)$-competitiveness for any online algorithm, which can be extended to $Ω(\log n)$ when $k = \text{poly}(n)$. Finally, the main result of this paper is a polylogarithmic upper bound on the competitive ratio for correlation $k$-clustering, using an algorithm inspired by the classic Pivot algorithm for correlation clustering.
Hermite expansion improves clustering algorithm accuracy and analysis
Hermite Brings a Laptop: Analyzing Frieze-Jerrum Rounding Yields Improved Approximations for Clustering Problems
Abstract: The Frieze-Jerrum rounding is a standard tool for rounding SDP relaxations of graph partitioning and clustering problems, assigning nodes to at most $k$ clusters using $k$ independent Gaussian vectors. Its analysis hinges on the collision probability $P_k(ρ)$ that two nodes whose SDP vectors have inner product $ρ$ are assigned to the same cluster. No tractable closed form for $P_k$ is known for $k\geq 4$, making it difficult to certify approximation guarantees and hindering the systematic search for better algorithms. We develop a Hermite-coefficient certification framework to derive accurate and tractable bounds on $P_k$. Using the Hermite expansion of Gaussian noise stability, we express $P_k$ as a power series with nonnegative coefficients, reduce these coefficients to one-dimensional Gaussian integrals, and certify finitely many of them, yielding rigorous bounds on $P_k$ over the entire correlation range. Our framework yields strengthened polynomial-time approximations for several clustering problems. For MaxAgree Correlation Clustering, we derive a $0.7818$-approximation, the first improvement in two decades over the $0.7666$ ratio of Swamy (2004). On the hardness side, we show that the integrality ratio of the standard SDP relaxation is at most $0.802$, and that approximation beyond that is Unique Games-hard. We also improve the best known ratios for the variant with at most $K$ clusters, MaxAgree$[K]$ (e.g., from $0.77$ to $0.8151$ for $K=3$). For Max $K$-Cut we resolve, via a structural property of the Hermite expansion, a conjecture of de Klerk et al. (2004) characterizing the Frieze--Jerrum approximation ratio for every $K\ge3$; we show that this ratio is tight, and determine it to within $10^{-6}$ accuracy for $K\le16$. Finally, we reduce the additive approximation error for modularity maximization from $0.42084$ (Kawase et al., 2021) to $0.3790$.
Pretrained model infers programs fast to generate and analyze data
From Data to Program: Fast & Direct Generative Program Inference from Empirical Data
Abstract: Estimating probability densities from a finite set of samples typically requires dataset-specific model fitting. We introduce PRODiGI, a pretrained data-to-program model that infers an explicit, executable generative program in a single forward pass. Pretrained on synthetic datasets paired with their ground-truth programs, PRODiGI accommodates diverse generative families and data dimensionalities through template prediction and non-autoregressive program parameter decoding. Its inferred programs support direct sampling, density and score evaluation, and inspection independently of the pretrained model. We further introduce program-space fine-tuning, which refines differentiable program parameters by matching generated and empirical samples while keeping model parameters intact. Experiments show that PRODiGI achieves lower average density and score MAE than existing pretrained models, while offering multi-fold speedups over its closest competitors. Program-space fine-tuning further reduces generation MMD by 84%. By turning empirical data into explicit, reusable programs, PRODiGI introduces a new direction for fast, interpretable tabular generative modeling.
Weighted ultrametric embedding with outliers gets better approximation
A $5/2$-Approximation for Weighted Ultrametric Embedding with Outliers
Abstract: Weighted ultrametric embedding with outliers asks for a minimum weight set of points whose deletion makes the remaining metric an ultrametric, equivalently, leaves no triple with a unique largest distance. We give a deterministic $5/2$-approximation using $O(n^5)$ arithmetic and comparison operations, improving the previous factor $3$ for arbitrary nonnegative vertex weights. Approximating the problem within any factor strictly below $2$ is UGC-hard.
Multi-view clustering improves consistency using adversarial learning
Adversarial Consistency-Guided Representation Learning for Multi-view Clustering
Abstract: Multi-view clustering aims to capture cross-view consistency while exploiting view-specific information. However, shared representations learned to capture cross-view consistency may still retain view-identifying information, potentially compromising the consistency of cross-view clustering structures. To address this issue, we propose ACGRL, an adversarial consistency-guided representation learning framework for multi-view clustering. ACGRL employs a gradient-reversal view discriminator to reduce view identifiability and obtain invariant reference representations. These representations are then frozen to provide fixed references for disentangling view-specific information from cross-view common information in the subsequent learning stage. The fixed reference representations are concatenated with the learned view-specific representations for reconstruction and clustering, with cross-view cluster alignment encouraging consistent clustering assignments. Experiments on four benchmark datasets demonstrate the superior clustering performance of ACGRL compared with representative multi-view clustering methods.
Small transformers learn to track hidden causes across contexts
Small transformers track Bayesian evidence for latent common causes via a context-invariant mechanism
Abstract: We present an in-depth investigation of how a form of Bayesian reasoning about common causes can emerge as a cross-contextual generalization in small, tractable transformers. Incrementing on recent work, our set-up (i) disentangles causal mechanisms in the model from the causal structure of the true data-generating process, (ii) orients more towards natural language prediction by considering inference of latent common causes, and (iii) considers whether and how Bayesian evidence accumulation for latent common causes can be implemented in representations and mechanisms that allow for cross-context generalization to novel test cases.
Inferring dynamic changes from distribution snapshots requires multiple time points
Beyond Gradient Flow: Identifiability and Recovery from Distribution Snapshots
Abstract: Inferring dynamics from snapshots of evolving distributions is fundamentally underdetermined: the Fokker-Planck equation constrains the drift $F$ only through its score-weighted divergence $\nabla\cdot F+F\cdot\nabla\logρ$, leaving a $ρ$-solenoidal gauge invisible to any single-time constraint. Time-indexed transport formulations cannot resolve this ambiguity: every admissible marginal path admits a curl-free explanation, minimum-action reconstruction selects it, and marginal fit alone cannot distinguish dynamically inequivalent explanations. Requiring one autonomous field to explain several marginals instead makes part of the hidden circulation visible as $\nabla\logρ$ changes across marginals. Separating instantaneous Fokker-Planck source constraints from the snapshot experiment, we show that the source constraints identify the field modulo the kernel of a stacked score-weighted divergence operator. For generic Gaussian shape variation, source constraints at $K\ge m$ time points in intrinsic dimension $m$ eliminate every polynomial gauge direction, whereas finitely many density snapshots alone admit aliasing; we give the obstruction explicitly. At a Gaussian anchor, for Sobolev smoothness $s$ and $n$ samples per time point, we derive a conditional lower rate $(nK)^{-2s/(2s+m+1)}$ for the tangent snapshot experiment, with a matching upper rate in a degreewise benchmark. Strong-form fitting is non-orthogonal to score error and cannot be repaired by spectral filtering. Instead, we estimate using smooth test functions while retaining the known diffusion term, and derive a finite-sample bound that separates sampling error from fixed-grid quadrature bias. Planted-circulation experiments confirm the predicted gauge contraction and expose a design tension between cross-slice information and covariance-aware whitening.
Time series models get faster with compact adaptive context prompts
Instance-Adaptive Prompts as Context for Time-Series Foundation Models
Abstract: Longer histories can improve time-series foundation models (TSFMs), but require substantially higher inference cost. We therefore ask whether contextual information can be provided more efficiently through a compact set of learned token embeddings. We introduce PaCTS, which generates a small set of instance-adaptive latent prompts in the form of continuous embedding tokens conditioned on the visible context. These prompts serve as compact context surrogates for frozen TSFMs. PaCTS constructs them from instance-specific global statistics and further refines them with segment-level temporal information, capturing both global characteristics and local temporal variations. The prompt module is jointly trained and deployed across heterogeneous time series with the frozen backbone. Extensive experiments demonstrate the effectiveness of prompts as context, consistently improving forecasting across context lengths and model architectures. With a shorter input context, PaCTS can outperform the same frozen backbone using double context while requiring substantially less inference computation. Compared with weight-space adaptation methods, PaCTS achieves stronger improvements and better out-of-distribution generalization.
Graph neural networks speed up knowledge graph learning with less memory
Scalable GNN-based Knowledge Graph Representation Learning with Efficient Message Passing
Abstract: Graph neural networks (GNNs) excel at representation learning on Knowledge Graphs (KGs), achieving stateof-the-art performance on tasks like link prediction or entity classification. However, their high computational complexity, inherent to their user-defined message passing (MP) algorithm, still prohibits their widespread adoption, especially for large KGs. Current efforts to mitigate the scalability bottlenecks of GNNs on KGs, such as subgraph sampling, are often task- and model-specific, and do not reliably guarantee lossless (if applicable) runtime/space reductions. To address this, we extend Relational Sparse Matrix Multiplication (RSPMM), originally designed to losslessly lower the space complexity of composition-based MP with pointwise composition functions, to support more expressive functions (e.g., 2x2 block-diagonal matrix multiplication, Givens rotation, circular correlation). Our method delivers significant task-independent reductions in runtime and space for current GNNs on KGs and facilitates efficient re-implementations of GNNs that maintain near state-of-the-art performance on challenging KG tasks, for a fraction of computational costs.
Interpretable graph learning that scales to millions of nodes
HARMONIA: Interpretable Graph Learning through Mixtures of Neural Bases
Abstract: Existing interpretable graph additive models still face limitations in either computational scalability or modeling flexibility. In terms of structural modeling, previous approaches either face quadratic scaling costs or sacrifice explicit source-to-target contribution decomposition. In terms of feature components, they rely either on per-feature neural networks or on single shared bases with limited feature specialization. We address both problems by introducing HARMONIA: Interpretable Graph Learning through Mixtures of Neural Bases, an interpretable-by-design framework. For feature modeling, HARMONIA introduces a Mixture of Neural Bases (MoNB), which routes features to specialized basis experts, enabling parameter sharing without sacrificing feature-specific specialization. For structural modeling, HARMONIA uses Relative Random Walk Probabilities (RRWP) to capture multi-hop and multi-path relationships, and proposes Sparse RRWP Aggregation (SRA) to compute these interactions through sparse graph propagation without quadratic pairwise complexity. HARMONIA retains a simple additive form in which predictions decompose into feature responses modulated by structural influence. Empirically, HARMONIA achieves stronger explanation recovery than existing interpretable graph baselines while maintaining competitive predictive performance and scaling to graphs with millions of nodes. These results show that interpretable graph learning can remain both faithful and scalable without sacrificing predictive effectiveness.
Non-adaptive queries reconstruct sparse random graphs efficiently
Non-Adaptive Learning of Sparse Erdős--Rényi Graphs via Affine Splitting
Abstract: Graph learning from edge-detecting queries concerns the reconstruction of an unknown edge set on a known vertex set. Each query reports whether a specified vertex subset contains at least one edge. We study non-adaptive schemes, in which all queries are fixed before any outcomes are observed, with the goal of achieving exact recovery using few queries and fast decoding. For general graphs on $n$ vertices with at most $k$ edges, non-adaptive recovery requires $Ω(\min\{k^2\log n,n^2\})$ queries in the worst case, even when a small error probability is allowed. In this paper, we consider Erdős--Rényi ($\mathrm{ER}$) graphs $G\sim \mathrm{ER}(n,q)$, with expected edge count $\bar{k}=q\binom{n}{2}$. Our scheme uses $O(\bar{k}\log n)$ queries and achieves exact recovery in $O(\bar{k}\log n)$ decoding time with probability tending to one throughout the regime $\bar{k}\to\infty$ and $\bar{k}=o(n^2)$. This improves the previous $O(\bar{k}^{1+δ}\log n)$ decoding guarantee for any fixed $δ>0$, while maintaining the same query order. The guarantee also extends beyond the previously studied regime $\bar{k}=Θ(n^{2θ})$ with fixed $θ\in(0,1)$. Our approach builds on the binary splitting method used in prior work, which organizes vertices into a hierarchy of successively smaller groups. We introduce three main changes: (i) we use random affine hash functions over a finite field to process each candidate pair in constant time; (ii) we apply the splitting procedure directly to the full graph, avoiding the need to combine solutions to multiple smaller graph-learning subproblems; and (iii) we bound the total decoding workload directly rather than deriving separate high-probability bounds on candidate counts at each level.
Graph reconstruction method improves constraint satisfaction and prediction
Feasible Flow Matching for Graph Reconstruction via Within-Sampling Primal-Dual Guidance
Abstract: Graph reconstruction from partial observations often comes with structural side information, such as degree bounds, triangle counts, or an edge-density band. Prior-Informed Flow Matching (PIFM) reconstructs graphs by transporting a local prior toward the graph distribution, but it provides no mechanism to incorporate this side information. We put forth Constrained Primal-Dual PIFM (CPD-PIFM), which augments the sampler with Lagrange multipliers that evolve along each trajectory. The multipliers respond to constraint violations at a predicted endpoint and guide subsequent sampling steps without retraining. We prove that the sampler inherits PIFM's permutation equivariance and bound its expected terminal slack by a term that decays as the inverse square root of the number of steps, plus two approximation terms. On three link-prediction benchmarks and nine combinations of datasets and constraints, CPD-PIFM raises feasibility by 11-26 percentage points and remains competitive with fixed guidance without selecting a separate multiplier for each constraint.
Adaptive early exit boosts outlier detection accuracy and speed
When Less Compute Is More: Adaptive Early Exit Improves Pretrained Outlier Detection
Abstract: Pretrained tabular foundation models process every dataset at a fixed depth, with inference costs growing with dataset size. To address this, we present the first study of depth-adaptive early-exit for pretrained outlier detection models. While early-exit is typically motivated by efficiency, we uncover a surprising benefit: exiting at the optimal intermediate layer can also improve detection performance on diverse real-world benchmarks by 4.7-7.3% on average, consistent across three distinct foundation models. First, we investigate the factors driving these gains, and identify a key mechanism: context pollution, i.e., the presence of outliers among in-context samples. Our analysis reveals that nearby in-context samples exert increasing influence on query predictions at greater depths, consistent with a retrieval-based view of these models. In effect, early-exit alleviates the adverse effects of retrieving accurate-yet-polluted neighbors, with gains of 13-21% when context pollution matches the natural outlier rate. Motivated by these findings, we pretrain a plug-in router to select a dataset-specific exit layer, using query outlier labels as privileged information available only during router training. The router operates post hoc, leaving the base model parameters and prediction head unchanged. Experiments on three large real-world benchmarks show that, on clean context, the router recovers up to 45% of the oracle gain with up to 1.8x speedup across three pretrained backbones, with larger gains as context pollution increases.
Rondo uncovers repeated patterns in streaming time series data
Rondo: Unsupervised Discovery of Recurring Temporal Structure
Abstract: Many real-world time series data exhibit structural properties at multiple scales, from short, recurring units to complex sequences composed of these units. Unsupervised discovery of both these components and structure enables the design of intelligent systems that help interpret temporal data, thereby limiting the amount of costly human annotations required. Existing modeling approaches typically overlook the hierarchical structure inherent to many time series, treating recurring patterns at different temporal scales as independent structures. Moreover, most assume access to the complete data sequence and treat discovery as a static process, limiting their ability to evolve as new observations arrive. We introduce Rondo, an unsupervised approach for modeling recurring hierarchical structure in continuous temporal streams. By explicitly constructing vocabularies of reusable units and their recurring compositions, Rondo captures structure shared across complex temporal patterns while refining and expanding its discoveries as the stream evolves. Evaluations on temporal sequences spanning diverse domains and data modalities show that Rondo outperforms existing unsupervised recurrence-discovery baselines, with particularly pronounced advantages in limited-data and continual-stream settings. These capabilities provide a stronger foundation for recurring-pattern discovery, scalable behavior understanding, and adaptive intelligent systems operating on long, unlabeled temporal streams.
Hyperbolic graph networks adapt using local topology for better predictions
Topology-Adaptive Hyperbolic Graph Attention Networks Guided by the Hyperbolic Sombor Index
Abstract: Hyperbolic geometry has emerged as a principled space for representing hierarchical graphs. However, existing hyperbolic graph neural networks typically rely on shared curvature configurations and feature-driven attention, failing to explicitly exploit local hierarchical topological patterns. To bridge this gap, we introduce the Hyperbolic Sombor Index (HSO) as a lightweight structural prior for capturing hierarchy-indicative degree stratification. Building on this, we propose \textbf{HSO-GAT}, a topology-adaptive hyperbolic graph attention network that unifies geometric adaptation and message propagation. Specifically, it comprises two complementary modules: HSO-Guided Local Curvature Adaptation, which performs adaptive node-wise geometric scaling from aggregated node-level HSO signals, and HSO-Gated Hyperbolic Graph Attention, which enables structure-aware message passing through feature-conditioned gating. Theoretically, we establish the monotonic sensitivity of edge-level HSO to degree imbalance and analyze the validity and radial scaling properties of node-adaptive hyperbolic mappings. Extensive experiments on eight benchmark datasets demonstrate that HSO-GAT consistently achieves state-of-the-art performance in both node classification and link prediction tasks.
Efficiently identify important features in mixed sparse classifiers with fewer measurements
Efficient Support Recovery of Mixtures of Sparse Linear Classifiers with Less Measurements
Abstract: The support recovery problem in mixture of linear classifiers intends to identify which features actually matter when data is generated by a mixture of several linear decision rules. In particular, the aim is to recover the support (nonzero coordinates) of $l$ unknown $k$-sparse vectors from sign measurements. Each measurement is generated by selecting one of the $l$ vectors uniformly at random, and returning the sign of its inner product with a chosen measurement vector. In this paper, we propose adaptive and non-adaptive schemes that significantly improve upon prior results by reducing the number of measurements and achieving sublinear decoding time simultaneously. In particular, our adaptive constructions substantially reduce measurements compared to existing approaches, while also lowering decoding complexity from super-quadratic to sublinear in the ambient dimension. We further provide a non-adaptive scheme that improves previous measurement bounds while maintaining efficient decoding. Overall, our approach yields a more efficient trade-off between sample complexity and decoding time for support recovery in mixture models than previously known methods.
Graph clustering method improves results despite missing data
Robust Graph Clustering Network for Multiple Missing Data
Abstract: Clustering on graphs where both node attributes and structural links are partially missing remains a challenging task. Existing methods typically rely on imputation-then-clustering on single-view missingness incomplete graphs, which are vulnerable to cross-view error propagation and cluster-boundary blurring under simultaneous attribute and structure missingness. To address these limitations, we propose a Robust Graph Clustering Network for Multiple Missing Data (RGCN), which is designed to handle simultaneous node attribute and graph structure incompleteness. RGCN introduces three key innovations: First, we design a view-decoupled dual-branch imputation to mitigate interference and enable mutual enhancement in recovering missing data. Second, we employ a multi-hyperspherical mixture prior to enhance intra-cluster compactness and inter-cluster separability on a directional latent manifold. Third, a boundary-aware contrastive enhancement objective mitigates the blurring of clusters caused by imputation bias. Extensive experiments on real-world datasets demonstrate that RGCN consistently outperforms state-of-the-art baselines under various missing patterns.
Faster algorithms for linear programming using rank based steps
Faster Linear Programming with $\sqrt{\mathrm{rank}}$ Linear System Solves
Abstract: Lee and Sidford [LS19] showed that the linear program $\min\{c^\top x\ :\ A^\top x=b,\ l\leq x\leq u\}$ over $x\in\mathbb{R}^m$, where $A\in\mathbb{R}^{m\times n}$, can be solved to accuracy $ε$ using $O(\sqrt n\log^{13}m\cdot\log(mU/ε))$ solves of linear systems in $A^\top\mathbf DA$ for positive diagonal matrices $\mathbf D$, where $U$ bounds the magnitudes of the input and of the initial point. Theirs is the first such bound governed by $\mathrm{rank}(A)=n$ rather than by the number of constraints $m$. Song [Son19] mentioned that reducing the $\log^{13}m$ factor is an interesting future direction. Given an interior point and a finite certified magnitude bound $U$, we give an algorithm that uses $O(\sqrt n\log^{4}m\cdot\log(mU/ε))$ solves of such linear systems, improving the Lee--Sidford bound by a factor of $\log^{9}m$. We conjecture that $O(\sqrt n\log(mU/ε))$ such linear-system solves suffice.
Selective transfer boosts graph learning by judging data trustworthiness
SUCRe: Selective Uncertainty-Aware Contrastive Representation for Graph Transfer Learning
Abstract: Graph transfer learning (GTL) provides a promising paradigm for adapting knowledge from source graphs with sufficient labels to label-scarce target graphs. However, existing approaches often assume that transferred knowledge is uniformly reliable, ignoring the different transferability of samples caused by structural and distribution shifts across graphs. This limitation leads to negative transfer and unnecessary computational overhead. In this work, we propose SUCRe, a selective uncertainty-aware contrastive representation method for GTL. The key idea is to selectively adapt and transfer graph knowledge according to its estimated reliability. Specifically, we introduce structure-aware entropy-based matching discrepancy, which jointly models feature uncertainty and structural coherence to ensure accurate feature adaptation between graphs. Moreover, we develop a domain-aware semi-hard negative sampling strategy that constructs informative contrastive sets by filtering unreliable cross-domain relationships, reducing computational redundancy while enhancing representation discrimination. Extensive experiments on graph transfer benchmarks demonstrate that SUCRe achieves competitive performance with improved efficiency.
BridgeMem improves predictions by tracking pair-specific event changes
BridgeMem: Causal Dyadic Transition Residuals for Temporal Knowledge Graph Forecasting
Abstract: Temporal knowledge graph forecasting aims to infer future relational facts from the temporal structure of observed events. Existing forecasters mainly summarize history through entity states, relation states, paths, or exact recurrence. These views often miss pair-specific transition evidence, that is, the way prior relations between the query actor and a candidate change the odds of the target relation. We introduce BridgeMem, which estimates this quantity as a residual added to the log scores of a frozen full-vocabulary forecaster. For each candidate, BridgeMem retrieves the pair's events that strictly precede t, encodes their relations, directions, and lags, and converts them into a likelihood-ratio correction. A support-adaptive empirical-Bayes reader trusts exact transition counts where they are abundant and backs off to a learned attention estimator where they are sparse. The backbone's own uncertainty gates the correction, so confident queries and candidates without dyadic history are left unchanged. On five benchmarks, BridgeMem improves on the strongest of nine baselines from 2021--2026 in all 20 filtered MRR and Hits@{1,3,10} comparisons, with MRR gains of 0.0213, 0.0164, 0.0216, 0.0112, and 0.0028 over the best prior result. These results show the value of explicit dyadic transition modeling.
Graph learning improves connectivity from limited data
Graph Learning with Spectral Connectivity Priors for Scarce Data
Abstract: Learning a sparse graph from scarce data is practically important but challenging. Motivated by the desirable combination of local sparsity and strong global connectivity exhibited by expander-like graphs, we propose spectral connectivity-regularized graph learning (SCoGL), a framework that incorporates a family of Laplacian spectral priors to explicitly promote global connectivity. Specifically, SCoGL augments a combinatorial-Laplacian-constrained graphical lasso (GLASSO) objective over a target adjacency matrix $\mathbf{W}$ with a general connectivity prior computed from Laplacian eigenvalues. We derive gradients for several representative connectivity priors and develop a projected gradient descent (PGD) algorithm with Armijo backtracking to efficiently optimize $\mathbf{W}$. Experiments show that the proposed SCoGL variants improve graph recovery and enhance downstream tasks such as graph signal denoising when signal observations are scarce.
XLOG integrates neural perception with logic for faster reasoning
XLOG: A CUDA-Native Engine for Neurosymbolic Integration
Abstract: xlog is a CUDA-native logic programming engine integrating neural perception with deterministic Datalog, probabilistic inference, and epistemic world views through a typed frontend and provider-owned CUDA runtime. Its reasoning modes share device data planes, but their execution boundaries differ: ordinary Datalog and exact inference are host-orchestrated, while certified resident recursive and Monte Carlo sampled cores record zero tracked host-device transfers before a bounded terminal receipt. The probabilistic path supports end-to-end gradients through GPU knowledge compilation from provenance to CNF to Decision-DNNF, exact weighted model counting, and backward gradients. A final smoothed circuit is certified against its source formula before caching or evaluation. Circuit caching yields a 2.74x MNIST-addition training speedup; a worst-case-optimal join subsystem yields a 27.96x geometric-mean gain over xlog's binary-join baseline. MNIST-addition accuracy matches Scallop's (0.9561 versus 0.9468), but no per-epoch speed claim is made because baseline epoch time varies with CPU quota. In five hub-skewed triangle-counting cases, the Souffle-to-fused-xlog execution-time ratio rises from 0.88x at 150k edges, where Souffle is faster, to 5.54x at 1.2M; fused peak device allocations are 85-1,033 MB versus 3,287-44,979 MB for the materializing arm. Exact inference is correctness-equivalent to but slower than ProbLog2. On a public video benchmark, a proximity predicate trained only through symbolic credit replaces hand-set geometry at unchanged held-out accuracy; within Event-Calculus rule search it fails ten-fold cross-validation and does not transfer on a leak-free split. On a maritime corpus, weighted clauses beat crisp selection by 0.065 F1, with the result reproduced by one chronological training pass.
Graph neural network improves node classification using shared experts
PreGS: A Parameter-Transfer-Based Multi-Expert Graph Neural Network for Node Classification
Abstract: Graph neural networks have achieved strong performance in node classification by aggregating information from graph neighborhoods. However, a single aggregation mechanism may be insufficient to capture diverse structural patterns across graph datasets. Moreover, independently training multiple structural branches can introduce substantial overhead without necessarily producing stable node representations. To address these issues, this paper proposes PreGS, a parameter-transfer-based multi-expert graph neural network framework. PreGS first pretrains a multi-head graph attention network (GAT) and transfers the linear transformation weights of its first-layer attention heads to multiple GraphSAGE experts. The transferred experts are frozen and used as complementary structural branches. The fused raw node features, GAT head representations, and GraphSAGE expert representations are fed into a multilayer perceptron (MLP), whose output is further fused with the pretrained GAT logits. Based on PreGS, we further develop PreGSv2, which introduces source-level weighting and a structural gating mechanism for adaptive multi-source feature integration. Experiments on eight public graph datasets show that PreGS and PreGSv2 achieve competitive performance against representative graph neural network baselines. Ablation, parameter-transfer, sensitivity, aggregator, visualization, and training-time analyses further validate the effectiveness and stability of the proposed framework. The code and datasets are available at https://github.com/LH-Czc/PreGS.
WaterBERT improves understanding of water treatment literature
Domain-Adaptive Pretraining Enhances Water Treatment Semantic Representation for Large-Scale Structured Literature Mining
Abstract: Water treatment research is expanding rapidly, but much of the knowledge acquired from this research remains scattered across unstructured literature. The field still lacks a dedicated language model that can efficiently capture water treatment-specific domain semantics for large-scale literature mining. Here, we address this by developing WaterBERT, a domain-adapted encoder model designed for semantic representation and structured information extraction from water treatment texts. WaterBERT was developed by continual pretraining on a large-scale water treatment corpus comprising about 2.97 billion tokens. Three fine-tuned models based on WaterBERT were systematically evaluated on downstream tasks, achieving the best overall performance among general-purpose and domain-specific BERT models, with F1 scores of 90.12% for multiclass treatment process classification, 79.50% for named entity recognition, and 74.04% for relation extraction. Beyond these benchmark tasks, we further demonstrated WaterBERT's advantages for large-scale literature processing. Applied to 5,144 Environmental Science & Technology articles, WaterBERT-BERTopic identified coherent, diverse, and domain-specific research topics without predefined categories. Building on WaterBERT, we processed 693,211 abstracts at substantially lower cost than commercial LLMs while retaining competitive extraction performance to construct a structured water treatment knowledge graph. The knowledge graph was then integrated with lexical and dense retrieval to develop a Water Knowledge-Enhanced Retrieval System (WaterKERS), which achieved a relevance score of 77.7, substantially outperforming text-based retrieval baselines (54.7-64.5). Through WaterBERT, this study provides a compact and scalable semantic foundation for large-scale information processing and evidence mapping in water treatment research.
Exact effect of adding data on Dirichlet-smoothed Markov models
Marginal Log-Likelihood Increments under Dirichlet-Smoothed Markov Estimation
Abstract: For a Dirichlet-smoothed transition model, the effect of adding one workflow trace to the training archive is an exact change in reference-weighted log likelihood. We derive that change and show that it is a weighted reduction of Kullback--Leibler divergence between the reference conditionals and the model. From this form we obtain an upper bound on the gain available to any acquisition, which expresses a millinat difference as a share of what is attainable, an exact covariance identity for the effect of the reference weighting, and a sign criterion for the interaction between two candidates, from which the batch objective is neither submodular nor supermodular. A case study on the BPI Challenge 2012 loan-application log measures all three and finds a positive selection result in one of the four combinations of reference weighting and budget unit. There, of two regressors fitted to identical descriptors and identical labels, the one that predicts individual increments far more accurately, median $R^2$ 0.87 against 0.62, realizes the smaller share of the attainable gain, 61 against 69 per cent, so ranking accuracy for individual traces is neither necessary nor sufficient for batch quality.
Graph neural cellular automata cluster large datasets efficiently
G-NAC: Graph Neural Automata Clustering via Emergent Domain Formation
Abstract: We introduce Graph Neural Automata Clustering (G-NAC), an unsupervised clustering method in which observations interact as cells on a fixed neighborhood graph. A shared recurrent graph-neural cellular rule evolves latent domain states through local interactions, which are converted into a rank-based spectral affinity for partitioning. Across 73 clustering tasks from 57 benchmark datasets, G-NAC achieved a mean adjusted Rand index (ARI) of 0.7951, comparable to Genie at 0.7941 and higher than the other evaluated baselines. Empirical training time and GPU memory scaled approximately linearly from 5,000 to 100,000 nodes. Learned transition rules also transferred from smaller source graphs to independent 100,000-node samples generated under matched conditions. These results demonstrate a recurrent graph-clustering formulation while identifying dependencies on graph quality, readout design, and source-target similarity.
Local fair pagerank improves ranking fairness with faster computation
Locally Fair PageRank: Mean-Field Approximation and One-Step Refinement
Abstract: Graph-based ranking methods such as PageRank can amplify structural disparities in networks, motivating fairness-aware ranking mechanisms for sensitive groups. Locally Fair PageRank (LFPR) enforces fairness through local propagation, but exact computation requires repeated iterations until convergence, limiting scalability on large graphs. We develop a scalable analytical framework for approximating Neighborhood Locally Fair PageRank and Uniform Locally Fair PageRank. By introducing a group-aware heterogeneous mean-field representation, the framework aggregates structurally similar nodes into degree classes and derives closed-form approximations of stationary LFPR scores, avoiding repeated propagation over the fairness-aware transition matrix. We develop a One-Step Refinement (ORF) mechanism that applies the fairness-aware propagation operator once to the mean-field estimate, incorporating node-specific neighborhood information without iterative convergence. The fluctuation analysis characterizes degree-dependent variability around the mean-field solution and shows that the coefficient of variation decreases with increasing in-degree. The mean-field approximation reduces the computational cost of exact LFPR from iterative graph-scale propagation to linear-time node-level estimation, while ORF requires one graph traversal. Experiments on six real-world networks show strong agreement with exact LFPR scores and rankings, preservation of group-level fairness, and substantial runtime reductions. The mean-field approximation reduces complexity to $\mathcal{O}(n)$, while ORF improves accuracy with $\mathcal{O}(m+n)$.
Graph learning method cuts label noise impact and speeds training
Particle Competition and Cooperation for Robust Graph Convolutional Network Learning Under Label Noise
Abstract: Graph Convolutional Networks (GCNs) are highly sensitive to label noise, since corrupted supervision can propagate through the graph and degrade learned node representations. This work proposes PCC+GCN, a hybrid framework that uses Particle Competition and Cooperation (PCC) as a graph-based label-refinement stage before GCN training. PCC identifies suspicious labeled nodes through particle domination dynamics and determines whether their labels should be preserved, removed, or reassigned before GCN training. The framework also allows the graph used by PCC to be augmented with feature-based $k$-nearest-neighbor edges, while the GCN itself is trained on the original graph structure and node features. The proposed method was evaluated on ten graph datasets from the NoisyGL benchmark under conventional Uniform, Pair, and Random label noise, as well as under instance-dependent label noise. A detailed hyperparameter analysis was also conducted on Cora, CiteSeer, and PubMed. Under conventional noise, PCC+GCN achieved the highest overall average accuracy and the best average rank among the evaluated methods, with an average gain of $1.67$ percentage points over the baseline GCN across the clean setting and all noisy scenarios. Under instance-dependent noise, PCC+GCN remained competitive with the best-performing robust methods while requiring substantially lower execution time, being the fastest robust method on eight of the ten datasets. The results indicate that PCC-based label refinement provides an effective and computationally efficient preprocessing strategy for improving GCN robustness under noisy supervision.
Distributed method speeds up butterfly pattern counting in large signed graphs
Distributed Balanced Butterfly Counting in Signed Bipartite Graphs
Abstract: The balanced butterfly is a fundamental primitive for analyzing signed bipartite graphs and provides a basis for studying higher-order structural properties, such as clustering coefficients and community structure. Despite its importance, existing approaches primarily rely on serial algorithms for balanced butterfly counting, which become inefficient on large-scale graphs. To address this limitation, we propose a distributed algorithm, D-BBC, based on a hybrid MPI+TBB framework that exploits MPI for inter-process communication and Intel TBB for intra-node parallelism. We conduct an experimental assessment of the proposed approach across 15 real-world datasets. Experimental results demonstrate that, on a single-node distributed system, D-BBC achieves average speedups of 1321x and 16.2x over the serial BB2K and multi-core M-BBC implementations, respectively. Furthermore, D-BBC achieves a maximum speedup of 23.58x over the distributed baseline S-Monarch in terms of end-to-end execution time. These results demonstrate the efficiency of the proposed distributed approach and its potential to enable high- performance signed motif analysis on large-scale bipartite graphs.
Simple statistical features and large language models improve anomaly detection
LLM-Generated Feature Pools for Time Series Anomaly Detection
Abstract: We study how far a simple statistical pipeline can go on univariate time series anomaly detection under a strict selection protocol. The method extracts a small pool of statistics over sliding windows, scores each window with a transductive robust (MAD) model, and selects a feature subset per domain on a held-out tuning split. On TSB-AD-U it reaches $0.529$ per-series VUS-PR, above the best neural ($0.45$) and statistical ($0.44$) entries on the public leaderboard and within $0.06$ of the strongest pretrained foundation model, several of which use more supervision than ours. Ablations locate the cause: across three selection strategies and a hindsight oracle the score moves by $0.031$, and across the aggregation grid by $0.096$, while changing the candidate pool moves it by $0.226$. The candidate pool sets the ceiling; the search over it is second-order. We therefore generate a pool per domain by prompting a multimodal LLM with in-context example windows from that domain. The generated pools match the hand-crafted one under matched selection, and the two cover different domains: selecting over their union improves on the generated pool in all twelve generator-seed pairs and lifts the pipeline to $0.588$, matching the performance of the best entry on the leaderboard.
Multi domain clustering improves grouping of diverse data types
Multi-Domain Clustering via Measure Quantization
Abstract: Clustering is a fundamental task in data analysis, typically addressed through centroid-based methods such as K-means. In this work, we present a general framework for multi-domain clustering via measure quantization: given samples from multiple domains, we learn a shared set of cluster prototypes by minimizing a probability metric, such as the Sinkhorn divergence or the Maximum Mean Discrepancy, between each domain's probability measure and the measure of prototypes. Data points are then assigned to clusters either via nearest centroid, or via optimal transport, a collaborative strategy that couples all samples within a domain. A mini-batch optimization strategy makes both fitting and assignment scalable, reducing memory and computational cost while preserving clustering performance. Experimental results on 5 multi-domain benchmarks spanning image, audio and sensor data show that our Sinkhorn-based method consistently outperforms classical and multi-domain clustering baselines, and that this advantage persists when scaling to hundreds of thousands of samples.
Margin utility explains key machine learning methods for geo-mining data
Marginal utility, matrix factorization, and the Key-Value (KV) cache: a unified information-economic framework for sovereign geo-mining inference
Abstract: This paper builds a theoretical bridge between the economic notion of marginal utility and two machine-learning constructs, matrix factorization and the Key--Value cache of transformer language models. The singular value spectrum of a rating matrix is shown to be a diminishing marginal utility schedule for latent factors, the eigenvalue spectrum of the projected covariance operator to be the marginal utility schedule of a model's learned representation, and cache eviction and low-rank cache compression to be instances of constrained utility maximization under a memory budget. The three collapse into a single allocation rule: retain the top dimensions whose eigenvalue exceeds the shadow price of the binding constraint. The framework is applied to the automated extraction of structured information from geo-mining documents, where it motivates a multi-pass inference protocol, a layer-wise TIES model merging procedure, and a selection policy combining extraction quality, localization drift and energy, scalarized with a Conditional Value-at-Risk term on drift. Two empirical contributions are reported. An 11.2-million-parameter hierarchical classifier, trained in about five minutes on a single GPU, reaches 90.0 per cent level-1 accuracy on a held-out test set from a 973-document uranium-exploration corpus, against 92.0 per cent for a proprietary model on a fifty-document human audit of the same corpus, at a latency of 2.62 ms per card against approximately 2,000 ms for the API and at negligible cost. A diagnostic of uniform-density TIES merging exposes a reproducible degenerate mode in which the merged model returns token-identical outputs across five geographically distinct districts while declaring high confidence; re-executing the merge under layer-wise calibrated densities removes that signature on the diagnostic sample. The full-scale extraction benchmark, including LoRA fine-tuning, is reported as projected rather than measured and remains an empirical extension of this work.
Space needed to estimate distance grows fast with accuracy needs
A Near-Optimal Space Lower Bound for Euclidean Diameter Estimation in Dynamic Streams
Abstract: We study the space complexity of diameter estimation for a set of points in Euclidean space in the dynamic (turnstile) streaming model. The seminal work of Indyk (SODA 2003) gives a $c$-approximation to the Euclidean diameter of $n$ vectors using $n^{O(1/c^2)}$ space. Our main contribution is giving an essentially matching lower bound. Any dynamic streaming algorithm which can $c$-approximate the diameter of $n$ Euclidean vectors must use $n^{\tildeΩ(1/c^2)}$ space.
Maximum strong independent sets improve hypergraph clustering methods
Maximum Strong Independent Sets in Hypergraphs: Reductions, Bounds, and Greedy Certificates
Abstract: We study the maximum strong independent set problem in a finite hypergraph: find the largest vertex set that intersects every hyperedge in at most one vertex. This objective arises whenever each observed block is a local incompatibility constraint but transitive closure across overlapping blocks is not justified. A motivating example is multi-band LSH-MinHash deduplication, where each collision bucket gives local evidence, while connected-component contraction can impose spurious global equivalences. The paper develops an incidence-structural toolkit for this problem. We prove exact reductions for dominance, incidence twins, and weight-1 blocks; derive closed-form and low-weight upper bounds; introduce puncturing and covering certificates that sharpen those bounds; and analyze a layered greedy clustering algorithm driven by block weights and residual incidence. The algorithmic analysis includes feasibility, maximality, conditional optimality, a layered witness-matching upper bound, and incidence-local complexity bounds. The results give correctness, termination, fixed-point, and optimality certificates for broad incidence families, together with examples showing when different certificates separate or coincide.
Nonconvex methods achieve near optimal matrix recovery from few samples
Near-Optimal Nonconvex Matrix Completion
Abstract: We study nonconvex methods for matrix completion, the problem of recovering a low-rank matrix from a subset of its entries. Convex methods achieve sample complexity linear in the matrix dimension and the rank, up to logarithmic factors, whereas global guarantees for commonly used nonconvex methods require a higher polynomial dependence on the rank. We close this gap by analyzing Riemannian gradient descent (RGD) and Riemannian Gauss--Newton (RGN) methods. For an $n\times n$ matrix of rank $r$ with incoherence parameter $μ$ and condition number $κ$, the two methods achieve exact recovery with high probability from $O(μnr\log n\log(nκ))$ and $O(μnr\log n\log(2μrκ))$ observations, respectively. The methods use a multiscale residual initialization, while the analysis simultaneously controls the spectral error and incoherence. The resulting RGD iterates converge linearly, whereas RGN eventually converges Q-quadratically.
Improved method breaks one third barrier in label assignment optimization
Breaking the 1/3 Barrier for $\boldsymbol{k}$-Submodular Maximization under Matroid and Knapsack Constraints: A Proportional Top-2 Randomized Framework
Abstract: $k$-submodularity generalizes submodularity by allowing each selected element to be assigned one of $k$ labels, rather than being merely selected or not selected. We study the problem of maximizing a nonnegative non-monotone $k$-submodular function, where $k\ge 2$, under classical support constraints, including a single matroid constraint and a single knapsack constraint. Previously, the best known approximation guarantees for non-monotone constrained $k$-submodular maximization had long remained at $1/3$ or $1/3-\varepsilon$, even in basic settings such as cardinality, matroid, and knapsack constraints. We show that this $1/3$ barrier is not inherent: for both the matroid and knapsack settings considered here, we give randomized polynomial-time algorithms achieving an approximation ratio of $\sqrt{2}-1\approx 0.4142$. The algorithms use a simple randomized greedy rule: once an element is selected, its label is chosen only from the two labels with the largest marginal gains, with probabilities proportional to the positive parts of these two gains. The value-oracle query complexity is $O(n^2k)$ in the matroid setting and $O(n^3k^2)$ in the knapsack setting. These results give the first approximation guarantees exceeding $1/3$ for non-monotone $k$-submodular maximization under matroid and knapsack constraints.
Rotation method improves tracking nonlinear data patterns in streams
Rotation-Based Subspace Tracking for Robust Kernel PCA on Streaming Data
Abstract: Machine learning models process large amounts of data, and Principal Component Analysis (PCA) is a widely used technique to reduce the dimensionality of the data and extract useful features. In practice, datasets often change over time (data drift) and/or arrive one sample at a time (streaming data), making it infeasible to process the entire dataset at once in batch mode. Real-world data also often contains nonlinear patterns, which traditional PCA cannot extract. Kernel PCA addresses this by implicitly mapping samples into a Reproducing Kernel Hilbert Space (RKHS). Raw data also often contains outliers, which can have an outsized effect on the estimated subspace unless the algorithm is made robust. However, existing online robust kernel PCA algorithms are designed to converge to a subspace that is assumed to be fixed, and gradient-descent-based updates lose their effectiveness at tracking further changes once this initial alignment is achieved. This paper introduces a rotation-based update mechanism, which updates the subspace estimate by rotating it toward each new incoming feature vector in Reproducing Kernel Hilbert Space, rather than relying on gradient descent alone. We present two complementary rotation strategies, and show that the extent of rotation can be moderated by a robust influence function to mitigate the effect of outliers. Through experiments on synthetic streaming data with a known ground-truth subspace, we show that per-sample rotations converge faster than gradient descent alone, demonstrating an effective mechanism for dynamically tracking a nonlinear subspace in streaming data.
CodeTS generates and verifies time series from text using executable code
CodeTS: Verifiable Text-to-Time Series Generation via Executable Code
Abstract: Text-to-Time Series Generation (Text-to-TS) provides a promising paradigm for synthesizing time series from natural language, enabling scenario-specific generation when real observations are scarce or costly to acquire. However, existing methods typically lack an explicit mechanism for deriving generation logic from textual descriptions to guide time series synthesis. In this paper, we propose CodeTS, a verifiable framework that uses code as an intermediate generation interface, reformulating Text-to-TS generation as a Text-to-Code-to-TS process. CodeTS first maps textual temporal descriptions into an explicit code space, where executable code specifies how textual requirements shape target temporal patterns, and then obtains the time series through code execution. To learn this code generation process reliably without real code annotations, CodeTS constructs aligned Text-Code-TS triplets from structured temporal attributes for supervised initialization. More importantly, we further design multi-stage execution-based rewards that verify format validity, code executability, and time series quality, enabling real Text-TS pairs to provide training signals for Reinforcement Learning with Verifiable Rewards (RLVR). Extensive experiments on eight benchmarks across short, medium, and long generation lengths demonstrate that CodeTS provides a strong zero-shot solution for Text-to-TS generation, outperforming LLM-based baselines and achieving better averaged results than supervised generative baselines trained on the target datasets.
Chronos speeds up state changes across multiple data systems
Chronos: Efficient Bolt-on Branching Across Data Stores for Stateful Agentic Applications
Abstract: Data-centric applications increasingly use speculative execution to explore multiple candidate paths where each path modifies state distributed across heterogeneous data stores. This trend is intensified by the rise of tool-calling agents. Hence, applications need data systems that can create branches quickly, isolate state-modifying paths, and merge changes consistently across stores without imposing substantial query overhead. Existing systems provide only partial support, forcing applications to coordinate branches and merges manually, which increases overhead and risks inconsistent cross-store state. To solve this problem, we introduce Chronos, a bolt-on system that provides branching capability across heterogeneous data stores. We make two contributions. First, Chronos introduces a compact interval-based versioning technique that enables efficient branching and data sharing through simple query rewrite. Second, Chronos introduces a bolt-on architecture that separates branch management from data path within each store. Combined with interval-based versioning, this separation provides atomic cross-store visibility for merges and enables Chronos to support diverse data stores without modifying their engines. We implement Chronos for PostgreSQL, SQLite, DuckDB, Qdrant, and a DBMS-backed filesystem. We evaluate it using cross-store agent workflows, MCTS-style exploration, and per-store benchmarks. Chronos runs MCTS-style exploration up to 16.7x faster than existing approaches while maintaining practical query performance across the underlying stores. Under concurrent cross-store workflows, Chronos prevents partially visible merges while substantially outperforming serialized execution.
Temporal knowledge graph model improves fact prediction accuracy
Biquaternionic Space with Complex-valued Attention for Temporal Knowledge Graph Completion
Abstract: Temporal knowledge graph embedding (TKGE) models infer missing facts in knowledge graphs that evolve over time. Many existing models use a single geometric space, which can limit their ability to represent diverse relational patterns, or treat entity representations as static. We propose Biquaternionic Space with Complex-valued Attention (BSCA), a TKGE model that combines circular and hyperbolic rotations within a unified biquaternionic framework. A complex-valued attention mechanism adaptively fuses time-conditioned and relation-conditioned entity representations, allowing them to vary with temporal and relational context. Experiments on five benchmark datasets show competitive performance across datasets, with the largest improvement on GDELT: BSCA achieves an MRR of 52.1\%, compared with 38.1\% for the strongest baseline in our comparison.
Tool augmented systems improve time series question answering accuracy
T-SMART: Mechanism-Level Attribution for Tool-Augmented Time-Series Question Answering
Abstract: Large language models (LLMs) can struggle with time-series question answering (TS-QA), especially when numerical signals are serialized as text and require explicit computation. Tool-augmented approaches improve performance, but existing systems often intertwine language reasoning, computation, and perception, making it difficult to determine which components drive the gains. We present T-SMART, a neurosymbolic framework that separates these roles: a frozen LLM interprets questions and selects operations, deterministic tools perform numerical computation, and structured perception is invoked only when needed. Controlled paired ablations show that deterministic computation provides the dominant benefit, improving accuracy by 31.7 percentage points over direct LLM reasoning on serialized time series, while language understanding and perception offer smaller complementary gains. These results indicate that tool-augmented TS-QA benefits primarily from reliable numerical execution rather than additional language-model reasoning and provide a controlled framework for analyzing component contributions in neurosymbolic time-series systems.
Numerical stability challenges in database-driven matrix computations
Numerical Stability of Linear Algebra Operations over Relational Databases
Abstract: A large body of work in the database literature develops efficient algorithms for linear algebra and machine learning over matrices defined by relational joins, yet the numerical stability of such computations has so far received no attention. This is a practical concern: a join matrix can be much larger than the input database, and the repeated copies of input values it contains compound the floating-point errors incurred by the numerical operations performed over it. This paper initiates a formal investigation of numerical stability for linear algebra over database joins. We first show that backward stability, the standard yardstick of numerical stability, loses its effectiveness in this setting: join matrices form a structured subspace of the ambient matrix space, so a perturbation explaining a computed result need not correspond to any perturbed input database. This failure already occurs for operations as simple as matrix-vector multiplication. To overcome this limitation, we introduce projected backward stability, a generalization of backward stability from the computation of one function to that of a composition of two functions, and establish its connection to classical backward stability. In our database setting, the two functions are the join query and the numerical operation. We further introduce the database condition number as the square root of the ratio of maximal to minimal number of copies of input data values into the join matrix, and show that it quantifies how a perturbation of the join matrix is amplified into a perturbation of the input database, independently of the computation used. The database condition number coincides with the classical condition number of the expansion matrix that replicates input values into the join matrix.
Analysis reveals trade-offs in cutting knowledge graph data across silos
Cost Characterization of Vertically Partitioned Federated Knowledge Graphs
Abstract: Knowledge graphs are increasingly distributed across autonomous organizations that share an entity space but own disjoint subsets of relations, forming a vertical partition. Answering a multi-hop query may require combining facts from several silos, making the partitioning strategy a key data management decision that affects communication, indexing, load balance, and query latency. However, the costs associated with different partitioning strategies remain insufficiently studied. We formalize vertical partitioning as a design space and compare four strategies: semantic domain grouping, frequency-balanced partitioning, co-occurrence graph-cut partitioning, and random partitioning. We evaluate them using five metrics: communication cost, candidate index size, cross-silo path length, load balance, and end-to-end query latency. Three of the five prove to be determined by the graph and the silo count rather than by the partition, which reduces the design problem to two conflicting axes, cross-silo path length and load balance. Experiments on MetaQA and PathQuestion use a fixed federated knowledge graph question-answering architecture based on TransE embeddings and a frozen BERT encoder across three silo configurations. By keeping the learning model unchanged, we isolate the effect of partitioning and show that the trade-off between locality and balance holds only where each silo can hold several relations, weakening as the number of silos increases. The study provides practical guidance for deployments constrained by cross-silo reasoning or by silo load.
Evaluating historical search systems requires testing memory and data versions
A Historical Corpus Is Not a Historical System: Auditing Hindsight Leakage in Stateful Data Discovery
Abstract: Offline replay should estimate what a discovery system could retrieve at a historical point, yet freezing the corpus leaves interaction memory unconstrained. We formalize point-in-time (PIT) discovery through historical state $(D_t, θ_t, M_{< i})$ and introduce a paired replay that changes only memory availability. The protocol constructs PIT and full-stream Future views from behavior-only traces and audits selected entries with a Temporal Violation Rate. Across three table-text domains, two stream regimes, two retrievers, and five seeds (216,000 rows), Future inflated Asset Recall@100 by 2.62-5.24 points; all 12 paired intervals excluded zero. With behavior-only trace memory, PIT underperformed the no-memory Stateless condition; Future masked 32.7-48.4% of that harm. For a simulated positive-feedback cache, PIT added 4.65-18.96 points over Stateless while Future added another 4.11-9.58 points. On five timestamped FreshStack topics, Future exceeded PIT by 2.72 points [1.75, 3.71]. Historical evaluation must version and validate memory with the corpus.
Knowledge graph edits often displace correct answers in ranking lists
When Successful Knowledge Graph Edits Displace Correct Answers: Rank-Level Locality beyond Parameter Support
Abstract: Editing a knowledge graph embedding (KGE) model to promote a desired answer can displace correct answers from the returned list. Locality tests based only on facts that reuse the edited parameter can miss this ranking effect. We introduce a common rank-displacement audit at three scopes: facts supported by the edited parameter, other correct answers to the target query, and correct answers across queries with the same relation. We also derive dimensional and geometric conditions for an update to improve the target while exactly preserving selected scores. On FB15k-237 with DistMult and ComplEx, direct promotion always moves the target into the top ten, but does so without damage in only 23.0--23.2\% of edits. Strict preservation causes no measured damage, yet succeeds in only 1.3--1.4\%. Support-regularized entity editing gives the highest joint success, 36.3--37.7\%, while rank-truncated preservation reaches 32.8--34.7\% and reduces the mean number of displaced answers from about 14 to 1.2. Experiments across dimensions, scorers, ranking conventions, and a learned editor show that locality depends on both the protected scope and the editing mechanism. KGE editing should therefore report correction success together with the incidence and severity of rank displacement.
Faster local algorithm speeds up pagerank and graph analysis
Accelerating the Local Push Primitive for PageRank Computation
Abstract: We propose a local algorithm that computes an $\varepsilon$-approximate PageRank vector in the sense of Andersen, Chung, and Lang (ACL; Internet Math. 2007) with teleportation parameter $α$ in $\widetilde{O}\bigl(1 / \bigl(\sqrtα \, \varepsilon\bigr)\bigr)$ time with high probability, improving the $O\bigl(1/(α\varepsilon)\bigr)$ running time of their original local push method. Our method also applies to the $\ell_1$-regularized PageRank problem with a running time of $\widetilde{O}\bigl(1 / \bigl(\sqrtα \, ρ\bigr)\bigr)$ for regularization parameter $ρ$, giving a positive answer to the open problem posed by Fountoulakis and Yang (COLT 2022). Our faster primitive has the potential to improve a broad range of graph algorithms that rely on local push. For example, substituting our primitive into the ACL framework directly yields faster PageRank-based local graph clustering, and we also develop reductions that lead to faster algorithms for effective resistance estimation. Our main technical contribution is a potential-function analysis of a refinement of the active-set method of Wei and Yang (preprint 2026), which repeatedly invokes an SDD solver on the current active set of nodes and expands the set. We relate the potential decreases over consecutive blocks of expansions to show that the number of expansions is bounded by $\widetilde{O}\bigl(1 / \sqrtα\bigr)$.
Reifying knowledge graphs enables zero-shot link prediction with simple GNNs
Reification as a Transferable Vocabulary: Zero-Shot Link Prediction with Vanilla GNNs
Abstract: Knowledge graph foundation models such as ULTRA achieve zero-shot link prediction on unseen graphs through dedicated architectures that hard-code a transfer mechanism. In this work we move that mechanism out of the architecture and into the representation, by \emph{reifying} the input graph: every fact becomes a node, connected to its subject, object, and relation type through a fixed vocabulary of six meta-relations, with relation types as anonymous shared nodes rather than model parameters. On this representation, five textbook GNNs (GAT, GINE with sum and with mean+max aggregation, GraphSAGE, R-GCN), each trained on a single knowledge graph of 4,245 triples for 30 minutes on one NVIDIA A100, transfer zero-shot to 40 inductive link-prediction benchmarks. The best of them, an off-the-shelf GAT, matches ULTRA, a dedicated foundation model pretrained on three graphs, across ULTRA's own evaluation suite. The same fixed vocabulary extends to relational databases, a row becoming an entity and a foreign-key column a relation type; a preliminary probe on two unseen databases, with no cell values, schema text or in-context labels, shows a model of this family pretrained on three knowledge graphs ranking foreign-key targets far above random-initialization and degree controls. We release the code, the checkpoints, and the evaluation pipeline for all 40 benchmarks.
Hierarchical clustering meets key fairness axioms that flat clustering cannot
Hierarchical Clustering Can Jointly Satisfy Richness, Consistency, and Scale Invariance
Abstract: Despite its ubiquity, clustering lacks a universally accepted definition of what is a cluster. Kleinberg's Impossibility Theorem formalizes this difficulty by showing that no flat clustering method can simultaneously satisfy three natural axioms: scale invariance, richness, and consistency. In this paper, we ask whether this impossibility persists when the output is a hierarchy rather than a single partition. We show that, in contrast to the flat clustering setting, the hierarchical analog of these axioms are jointly satisfiable. In fact, there exist uncountably many hierarchical clustering methods satisfying these axioms, which we call admissible. We explicitly construct several admissible methods, including methods based on well-separated clusters and a non-binary version of single linkage. For certain pairs of admissible methods, the hierarchy produced by one always refines that produced by the other. This refinement relation defines a partial order on the class of admissible methods. This partially ordered set has no greatest element and contains uncountably many pairwise incompatible maximal elements, revealing substantial diversity among admissible methods. Nevertheless, this diversity is constrained: every admissible method contains a hierarchy of sufficiently well-separated clusters, and every finite collection of admissible methods shares such a nontrivial common backbone.
Specified counterfactuals reveal how past changes alter graph predictions
Breaking Predictions Is Not Enough: Specified-Foil Counterfactuals for Temporal Graphs
Abstract: Temporal graph counterfactual explanations typically change past events to change or invalidate an original prediction, while leaving its replacement unspecified. Yet a user facing a predicted outcome often asks which past conditions would make a particular alternative occur instead. We formulate this destination-specific question as the Specified-Foil Counterfactual: given an original prediction A and a foil B fixed before search, find a low-cost past-event intervention under which the same predictor selects B as top-ranked. Our trace-guided intervention search contrasts the completed execution of A with a reconstructed incomplete execution of B, maps their difference to DELETE, INSERT, REWIRE, RELABEL, and SHIFT operations, and verifies B through exact replay. We instantiate this principle with LiFTER on continuous-time dynamic graphs and TLogic on temporal knowledge graphs. On CTDGs, the method retains 85.7-93.6% of black-box greedy successes while reducing predictor evaluations by 75.0-80.0%; on TKGs, it reaches the specified foil in 74.8% of 600 comparisons. Executable traces thereby become computational structures for constructing conditions of unselected alternatives, rather than records used only to explain predictions already made.
Graph condensation improved for diverse node label patterns in networks
HERALD: High-Fidelity Exemplar Retrieval with Adaptive Landmark Distillation for Heterophily-Aware Graph Condensation
Abstract: Graph condensation aims to produce a small surrogate graph that preserves the downstream node-classification performance of a much larger original graph. Existing methods rely on Weisfeiler-Lehman neighbourhood aggregation or gradient-based distribution matching, both of which assume that adjacent nodes share the same label, an assumption that breaks down under heterophily. We propose HERALD (High-fidelity Exemplar Retrieval with Adaptive Landmark Distillation), a gradient-free graph condensation framework that adapts the node scoring and feature selection in the condensation pipeline to the graph's measured heterophily. HERALD selects features via a joint Fisher-discriminability and activation-density criterion that down-weights aggregated representations on heterophilic graphs, and scores nodes by a weighted combination of prototype representativeness, decision-boundary proximity, and Local Intrinsic Dimensionality (LID), where the weights are driven by a smooth sigmoid function of the heterophily ratio. Nodes are then assembled into a condensed subgraph through score-ordered BFS expansion, Personalised PageRank pruning, and class rebalancing, all at an identical storage budget to BONSAI, enabling direct comparison. Experiments on eight benchmark datasets spanning homophilic and heterophilic settings show that HERALD matches or outperforms state-of-the-art condensers on heterophilic graphs and remains competitive on homophilic ones across four GNN architectures.
Reinforcement learning finds causes of problems in simulated ad data
TRACE: Training Reasoning Agents for Causal Exploration with Synthesized Rewards
Abstract: Reinforcement learning with verifiable rewards (RLVR) has advanced language-model reasoning in domains such as mathematics and code, where objective answers are inexpensive to check. Diagnostic reasoning over complex data lacks this advantage: establishing the true cause of an anomaly often requires costly expert investigation and may remain ambiguous after the fact. We ask whether this asymmetry of verification can instead be engineered. We sample an intervention, inject it into a controlled simulator, and generate the observations it would produce. The hidden intervention provides an oracle label and objective reward, while the agent must still investigate noisy, confounded, and distributed evidence. We instantiate this approach in TRACE, a digital-advertising diagnostic environment with 12 root causes and fine-grained segment attribution. Agents investigate each episode using Python and SQL and must identify both the root cause and, when applicable, the affected segment assignment. On a held-out 235-episode test set, the strongest prompted baseline, Claude Opus 5, reaches 0.686 FullAttr@1. Supervised fine-tuning raises Qwen3.5-35B-A3B from 0.159 to 0.637, and subsequent RL with synthesized rewards reaches 0.757, outperforming all evaluated prompted baselines, including frontier closed-source models and a prompted Qwen3.5-122B-A10B model. The resulting policy also uses substantially fewer tool calls than the prompted 35B base. These results provide evidence that access to a scalable, objective training signal can be a more important constraint than model scale alone. More broadly, simulation-based verification can make otherwise ambiguous diagnostic reasoning tasks amenable to scalable reinforcement learning.
HOPE improves graph node classification in networks with diverse connections
HOPE: Heterophily-Aware Open-Set Node Classification with Pseudo-Extrapolation
Abstract: Standard open-set node classification methods rely on the homophily assumption, where connected nodes share labels. However, real-world graphs are often heterophilic, exposing the limitations of current methods and posing new challenges to open-set node classification. On the one hand, cross-class connectivity causes representations from different known or unknown classes to become intertwined after aggregation, undermining their discriminative capacity. On the other hand, structural mixture invalidates threshold-based open-set methods and cross-class feature interpolation, leading to unreliable unknown-class rejection. To address these challenges, we propose HOPE, a Heterophily-aware Open-set node classification method with Pseudo-Extrapolation. To adapt open-set graph neural networks (GNNs) to heterophilic scenarios, HOPE uses a structure-augmented feature initialization layer to capture multi-hop structural patterns. Meanwhile, we design a trustworthy neighborhood aggregation mechanism for standard GNNs to dynamically filter noisy cross-class neighbors. To enhance unknown-class rejection, we introduce a heterophily-guided pseudo-extrapolation strategy. It dynamically maintains known-class centers and extrapolates along cross-class neighborhood displacement directions, synthesizing pseudo-unknown proxies near structurally ambiguous regions. Finally, we optimize the network with joint classification and logit margin regularization, routing synthetic proxies into a dedicated rejection slot without imposing geometric margin constraints in the representation space. Extensive experiments on multiple datasets show that HOPE consistently outperforms state-of-the-art models, validating its effectiveness, robustness, and efficiency.
Non-adaptive one-bit communication matches adaptive mean estimation rates
Non-Adaptive 1-Bit Mean Estimation: Minimax Rates and the Sample-Interval Tradeoff
Abstract: We study distributed one-dimensional mean estimation under a 1-bit communication constraint. Each agent observes one sample, drawn independently from an unknown distribution, and returns a single bit in response to a query $Q: \mathbb{R}\to\{0,1\}$ chosen by a central learner. The distribution has mean in $[-λ,λ]$ and $k$-th central moment at most $σ^k$, for a fixed $k>1$. The order-optimal two-stage protocol of Lau and Scarlett uses responses from the first batch to choose the second-batch queries, motivating the question of whether this single round of interaction is necessary. We answer this negatively: for every $k>1$, a non-adaptive protocol attains the adaptive 1-bit minimax rate (and concurrent works reached the same conclusion via different strategies). We further determine the minimax sample complexity among non-adaptive 1-bit estimators when every one-set $Q^{-1}(1)$ is restricted to a union of at most $s$ intervals. Relative to unrestricted non-adaptive 1-bit querying, this constraint adds a term of order $(λσ/(s\varepsilon^2))\log(1/δ)$, giving the full tradeoff between sample complexity and interval complexity to within $k$-dependent constant factors. As a corollary, we identify, order-wise, the minimum interval budget needed to retain the unrestricted 1-bit minimax sample rate.
Graph topology generates strong node embeddings without training
Topology-induced Operators Reveal Complementary Graph Representations without Training
Abstract: Graph representation learning has largely focused on designing increasingly sophisticated models to transform graph topology into vector representations, or embeddings. However, the extent to which embedding quality depends on model learning, rather than on the underlying topological transformations, remains unclear. Here, we show that informative embeddings can be derived without complicated model design and gradient-based training. Propagating random features through implicit hierarchical structures induced by random walks and anonymous walks yields embeddings that capture node proximity and structural role, respectively. These two training-free embeddings preserve complementary aspects of graph organization and perform competitively with classic and recent methods across various node-, edge-, and graph-level tasks. They often require substantially less computation, resulting in a favorable quality-efficiency trade-off. Combining the two types of embeddings further improves inference quality of some tasks compared with using either embedding type alone. Our results suggest that informative graph embeddings can arise from carefully chosen topological transformations before any learning operation is applied.
URL extraction from scholarly papers varies by document format
URL Extraction from Scholarly Documents: A Cross-Format Comparative Analysis
Abstract: URLs in scholarly documents link to rich external resources such as datasets, software, publications, and websites. Extracting these URLs is crucial in the data preparation stage of many downstream tasks, such as link rot analysis, web crawling, and building knowledge graphs. However, existing studies often downplay this phase, simply extracting URLs from a single format, usually text directly converted from PDFs. We present a systematic study evaluating URL extraction across six input formats (text with annotation layer, LaTeX, HTML, XML, Markdown, and PNG converted from PDF). To support the evaluation, we compiled a benchmark dataset consisting of 2,338 manually annotated URLs from 200 arXiv papers spanning a wide range of domains over a 33-year period. In addition to evaluating individual file formats, we also compared 63 composite input-format combinations. Our extensive evaluations indicate that TEXTWAL achieves the best performance among single-format inputs, while TEXTWAL+LaTeX achieves the best overall URL extraction performance. The same trend is observed for URLs linking to open-access datasets and software. To further validate these findings, we apply our format-specific URL extraction pipelines to a longitudinal random sample of 364,744 arXiv papers spanning 33 years. We observe a sharp increase in URL density after 2015, along with remarkable differences in URL extraction across file formats over time. Overall, our study highlights the importance of selecting an appropriate format for URL extraction from scholarly documents. The dataset and code are publicly available at: https://github.com/lamps-lab/arxiv-url-bench .
Hierarchical system speeds up predictions on streaming data with edge and cloud
Streaming Hierarchical Inference with Tabular Foundation Models
Abstract: Tabular Foundation Models (TFMs) have recently demonstrated strong predictive performance through in-context learning, but their deployment in high-throughput data streams remains challenging due to communication overhead and latency. We propose \textit{HINT}, a hierarchical inference framework that combines edge-based retrieval with cloud-based TFM inference. A graph-based approximate nearest neighbor memory maintained over a sliding window provides local predictions and uncertainty estimates, allowing confident samples to be processed locally while uncertain instances are selectively offloaded, together with their retrieved context, to a cloud-hosted TFM. The framework exposes an offloading threshold and a neighborhood retrieval policy that can be varied to balance predictive performance and communication cost. Experiments show \textit{HINT} consistently identifies favorable trade-offs.
Understanding the cost and constraints in hierarchical clustering trees
Dasgupta's Hierarchical Clustering Objective: Geometry and the Price of the Cardinality Constraint
Abstract: The cost of a hierarchical clustering can be represented by an ultrametric whose lowest-common-ancestor labels are cluster cardinalities. We relate this known representation to the shortest-path geometry of a similarity graph. For a connected support graph $G$, let $d_G$ be its unit-length shortest-path metric and let the edge weights enter only the objective. We prove that the shifted Dasgupta optimum is exactly the minimum edge-weighted cost of a cardinality-realizable ultrametric that dominates $d_G$. Connectedification lemmas put this problem and its freely labeled dominating-ultrametric relaxation on the same class of connected binary hierarchies, labeled respectively by cardinality and graph diameter. As a sharp baseline, we determine the exact worst-case price of cardinality realizability: on every $n$-vertex instance the ratio of the two optima is at most $(2n-1)/3$, with equality on the unweighted complete graph; the sharp factor for the standard unshifted objective is $2(n+1)/3$. Our principal structural result bounds this gap by a hereditary weighted fragmentation profile defined through connected balanced cuts. Uniform local control gives an $O(\log n)$ gap, polynomial decay gives a constant gap, and the logarithmic order is tight even for unweighted trees of maximum degree $3$. On locally regular bounded-degree trees, the hierarchy can be constructed in $O(n\log n)$ time. An energy decomposition and a geometric density bound provide supporting instance-sensitive estimates. Thus the cardinality label has an unavoidable linear worst case but admits substantially smaller bounds on natural sparse graph classes.