aquaculture operators

Abstract: Imaging sonar enables underwater observation in conditions where optical imaging is ineffective due to darkness and turbid water. However, imaging-sonar systems previously used for ecological monitoring have typically been expensive, limiting their accessibility. Consumer forward-looking sonar has the potential to make fish monitoring more accessible, but its noisy imagery makes annotation and the development of automated methods challenging. We introduce the Huntington and Caltech Koi RGB and Sonar dataset (HaCKRS), which pairs Garmin LiveScope imaging-sonar recordings with top-down RGB video of koi carp. The dataset contains more than 105,000 temporally matched frame pairs, spanning approximately 3.3 hours of recordings across four range and orientation configurations. We provide frame-wise metadata, sonar geometry and coordinate information, synchronization data for all four configurations, and planar registration for the three horizontal configurations. The release focuses on paired observations and calibration rather than task-specific fish annotations. We intend HaCKRS to support annotation and the development of fish detection, tracking, and counting methods, and investigations into the potential of consumer sonar for ecological monitoring.

Abstract: Quantifying collective fish behavior requires accurate trajectories, yet multi-view 3D tracking remains challenging due to frequent occlusions, visually similar individuals, and the long-standing scarcity of identity annotations. We present TrackFish3D, a geometry-driven self-supervised framework for dense multi-camera 3D tracking of schooling fish. Instead of relying on appearance-based re-identification or manually annotated identities, TrackFish3D turns calibrated multi-view geometry into supervision: triangulation and reprojection consistency provide pseudo-associations, while a geometric encoder and global association transformer learn all-to-all cross-view correspondence within each frame. To make these associations identity-aware, TrackFish3D introduces a self-supervised contrastive objective that separates co-visible individuals in the embedding space, together with a temporal predictor that preserves identities and bridges short occlusions across frames. The resulting model is trained once on unlabeled footage and applied directly to unseen test videos, requiring no cross-view identity labels, temporal annotations, 3D ground truth, appearance features, or test-time optimization. On our benchmark, TrackFish3D improves 3D Multi-Object Tracking Accuracy from 87.7% for the strongest baseline to 95.8%. On the 3D-ZeF zebrafish benchmark, it achieves 81.1% MOTA, compared with 77.4% for the best geometric baseline. TrackFish3D also generalizes beyond fish, achieving strong results on real-world bird tracking.